Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00068 ATGCCTGAAGGGAGCAAAAGCAGAATACGTTTCAGCAAATTGTACAGTTTTTCTTGTTTGAAATCTCCATTCAGAGATGGTCATTCCCAAATTGGGCGGAAGGGGTACTCAAGGGTTGTCTACTGCAATGATCCAGATAACCCCGAAGCAGTTCAGTTGAATTATGGAGGCAATTATGTTTCAACAACCAAGTATACAGCTTTTAATTTCATCCCCAAGTCTTTGTTTGAGCAGTTCAGGAGGGTTGCAAATATCTACTTTCTTGTTGTTGCGTGTGTTTCATTTAGTCCATTGGCACCTTTTACTGCTCTTAGTATTGTTGCTCCTTTGCTGGTTGTGATTGGAGCTACTATGGCCAAGGAAGCTGTGGAAGATTGGAGGAGGAGAAAACAGGATATAGAGGCAAACAACCGAAAGGTTCAGGTGTATGGTAGAAATTATACATTTGTGGAGACTAGATGGAAGAAACTCCGTGTTGGTGATATCATTAAAGTGTATAAGGATGAATACTTTCCTGCTGATCTTCTTCTGCTTTCATCAAGCTATGATGATGGGATTTGTTATGTCGAGACTATGAATCTTGATGGAGAAACTAATCTAAAATTAAAGCATGCCTTGGAGGTGACAATTCATCTTCAAGATGAAAAATCTCTGCAAAAGTATAAGGCCATGGTTAAATGTGAGGATCCTAATGAAAATCTGTACTCGTTTATTGGAACTTTACAATATGATGGTAAAGAATATCCTCTTTCCTTGCAGCAGATCCTGTTAAGAGATTCTAAGCTGAAAAACACTGATTATATCTATGGCATTGTTATCTTTACTGGCCATGATACAAAAGTCATGCAGAACTCCACTGATCCTCCATCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAGATAATCTACATCCTCTTCAGTACCTTGGTTTTGATATCCTTTATTGGTTCTGTCTTTTTTGGTGTTGAGACCAAAAGGGATATTAGTTCTGGCAGGTATAGAAGATGGTATCTTCGTCCAGACAATACAACTGTGTTTTATGATCCTAGAAGGGCAACACTTGCTGCTGTTCTTCATTTTTTGACTGCCCTTATGTTGTATGGATATCTAATTCCAATATCACTTTATGTGTCCATAGAACTTGTGAAAGTTCTGCAGAGCATTTTCATCAACCATGACCAGGAAATGTATTTTGAAGAAACAGATAGGCCAGCTCGTGCACGCACATCTAATTTGAATGAGGAACTTGGTCAGGTTGATACAATATTGAGTGATAAAACTGGTACTTTGACGTGTAACTCGATGGAGTTTGTCAAATGTTCAATAGGGGGCATTCCGTATGGTCGTGGTATGACAGAAGTGGAGAAGGCACTTGTTAGGAGAGGAAGTGATGTGGAATCTGAAGTTGATGGGGGATCATCTGATATCCTGGGTCAGAGTAATGATGCTGTGGACTCTCGGCATTCAATTAAGGGCTTTAACTTTAAAGATGAGCGGATAATGATGGGGCAATGGGTTAATGAACCATATCCAGACTTCATTCAGAGATTCTTTCGAGTTTTAGCTATTTGTCACACAGCTATTCCAGATGTAGATAAAGAGTCAAGAGAAATTTCCTATGAAGCTGAGTCACCAGATGAAGCAGCTTTTGTCATAGCTGCAAGGGAGCTTGGTTTTGAGTTTTTTGCAAGGACACAAACAAGTATATCGTTACATGAATTGAATTATGAAAGTGGAAAAAAGGTTGACAGAGTGTACCGGCTTCTGCATGTCTTCGAGTTCAGCAGTTCCCGCAAAAGAATGTCAGTGATAGTGAGGAATGAGGAAAATCAATTATTGCTCCTATGCAAGGGTGCTGACAGTGTAATGTTTGAAAGGATCTCGCAACATGGAAGACAGTTTGAAGCTGAAACCAGGGATCATATCAAAAGTTATTCTGAGGCTGGTTTAAGAACCCTTGTAATTGCATACCGTGAACTTGATGAAGAAGAATATAAGTTGTGGGACAATGAATTTTCAAAGATCAAAACTACTGTAACAGAAGACCGAGATGTGTTGGTAGATGCAGCTGCTGATAAGATGGAAAGGGATTTGATTCTTCTTGGTGCTACTGCAGTTGAGGATAGACTGCAAAAGGGGGTTCCTGAATGTATTGAAAAGCTCGCCCGGGCAAAAATCAAGTTATGGGTATTAACCGGAGACAAGATGGAAACTGCAGTCAACATAGGGTATGCATGTAGTTTACTTAGACAAGACATGAAACAGATAGTGATCACTCTGGATTCACCAGATATCCTATCATTGGAAAAACAAGGGGACAAGGAAGCTCTATCAAAGGCCTCTCTTGAAAGCATTAAGAAGCAAATTAGAGAAGGAATCTCACAAATCAAGTCTGCAAAAGAGAGTTCTAATACAAATAAAGGAAGTTCTTCTGGGTTTGGCTTGATAATTGATGGGAAGTCCTTGGATTATTCTCTTAACAAGAATTTGGAAAGGTCCTTCTTTGAGCTGGCAATTAATTGTGCTTCTGTCATATGTTGCCGATCTTCACCCAAACAAAAAGCTCGCgttacaaaattggtgaaattgggaacagggaagacaacattatctatcggcgatggggcaaatgatgttggcatgcttcaggaggctgatattggagttggcattagtggtgctgaagggatgcaggctgtaatggcaagtgattttgcaatagctcaattccggtttctggagcgtttgctgttggtacatggacactggtgttatcggcgtatatcaatgatgatatgctattttttctataaaaacattgcatttggatttaccctattttggtttgaggcatatgcttctttctctggatgtttctgccaaactttgcctaaagtatccttatctatatctagagggagtagaggatatcctcttcagctggccccggattcttggctggatgttgaatggagtccttag 2985 0.34 MPEGSKSRIRFSKLYSFSCLKSPFRDGHSQIGRKGYSRVVYCNDPDNPEAVQLNYGGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPFTALSIVAPLLVVIGATMAKEAVEDWRRRKQDIEANNRKVQVYGRNYTFVETRWKKLRVGDIIKVYKDEYFPADLLLLSSSYDDGICYVETMNLDGETNLKLKHALEVTIHLQDEKSLQKYKAMVKCEDPNENLYSFIGTLQYDGKEYPLSLQQILLRDSKLKNTDYIYGIVIFTGHDTKVMQNSTDPPSKRSKIERKMDKIIYILFSTLVLISFIGSVFFGVETKRDISSGRYRRWYLRPDNTTVFYDPRRATLAAVLHFLTALMLYGYLIPISLYVSIELVKVLQSIFINHDQEMYFEETDRPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIGGIPYGRGMTEVEKALVRRGSDVESEVDGGSSDILGQSNDAVDSRHSIKGFNFKDERIMMGQWVNEPYPDFIQRFFRVLAICHTAIPDVDKESREISYEAESPDEAAFVIAARELGFEFFARTQTSISLHELNYESGKKVDRVYRLLHVFEFSSSRKRMSVIVRNEENQLLLLCKGADSVMFERISQHGRQFEAETRDHIKSYSEAGLRTLVIAYRELDEEEYKLWDNEFSKIKTTVTEDRDVLVDAAADKMERDLILLGATAVEDRLQKGVPECIEKLARAKIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSPDILSLEKQGDKEALSKASLESIKKQIREGISQIKSAKESSNTNKGSSSGFGLIIDGKSLDYSLNKNLERSFFELAINCASVICCRSSPKQKARVTKLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGCFCQTLPKVSLSISRGSRGYPLQLAPDSWLDVEWSP 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00068 994 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 5 958 - -
Gma05g00068 994 SUPERFAMILY Calcium ATPase, transduction domain A 143 284 IPR008250 -
Gma05g00068 994 Pfam Phospholipid-translocating P-type ATPase C-terminal 901 958 IPR032630 -
Gma05g00068 994 Pfam Phospholipid-translocating ATPase N-terminal 40 103 IPR032631 -
Gma05g00068 994 SUPERFAMILY HAD-like 419 928 IPR036412 -
Gma05g00068 994 CDD P-type_ATPase_APLT_Dnf-like 57 964 - -
Gma05g00068 994 SFLD p-type atpase 408 924 IPR044492 -
Gma05g00068 994 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 841 956 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma05g00068 994 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 959 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gma05g00068 994 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Gma05g00068 994 PRINTS P-type cation-transporting ATPase superfamily signature 873 892 - -
Gma05g00068 994 Gene3D - 548 701 IPR023299 GO:0000166
Gma05g00068 994 Gene3D - 111 287 - -
Gma05g00068 994 Coils Coil 116 136 - -
Gma05g00068 994 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Gma05g00068 994 SFLD Haloacid Dehalogenase 408 924 - -
Gma05g00068 994 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 958 - -
Gma05g00068 994 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 501 669 IPR023299 GO:0000166
Gma05g00068 994 SUPERFAMILY Calcium ATPase, transmembrane domain M 49 965 IPR023298 -
Gma05g00068 994 Pfam E1-E2 ATPase 136 328 - -
Gma05g00068 994 Gene3D - 702 913 IPR023214 -
Gma05g00068 994 Pfam Cation transport ATPase (P-type) 542 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00068 Gma-Chr5 661676 670682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00068 9 971 Primary Pumps ATPases AT1G68710 64.790 0.0 1344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00068 K01530 - gmx:100817020 1880.92