Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00066 ATGGAGCATGTTTTGGAGAAAAGATTTCCTCTTAATGCAGAAGATTACACATTATATGAAGAAGTTGGTGAAGGCGTTAGTGCCTCCGTATACAGGGCTCTCTGTGTTCCACTCAATGAGATAGTGGCCATCAAGGTTCTCGATCTAGAGAAGTGCAATAATGACTTGGATGGCATTCGTAGAGAGGTACAGACCATGAACTTGATTGATTACCCGAATGTTTTACGGGCACATTGCTCTTTTACTGCTGGACACAATCTATGGGTTGTGATGCCATACATGGCAGGGGGGTCTTGCcttcatataatgaaatctaactatcctgagggttttgaagagcctgttattgctactttattgCATGAAGTTCTCAAAGCTCTTGTCTATCTTCATGCCCATGGTCACATACATAGAGATGTAAAGGCTGGGaatattctgcttgattctaatggtgcagtcaaactagctgactttggagtgtcagcatgtatgtttGATACTGGAGATAGGCAACGTTCAAGAAACACTTTTGTTGGAACACCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTACATGGATATGATTTTAAAGCAGATATATGGTCATTTGGTATAACGGCACTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCACCTATGAAGGTTTTGCTCATGACTTTACAAAATGCCCCTCCAGGTCTTGACTATGAAAGAGACAAAAAATTTTCAAAGGCTTTCAAAGAGTTGGTTGCCACCTGCTTAGTAAAAGACCCAAAAAAGCGTCCAAGTTCAGAAAAGCTTTTAAAACACCACTTCTTTAAACAAGCACGTGCCAGCAAATATTTAGCTCGCACCATTTTAGAAGGCCTTGCTCCTTTAGGAGATCGTTTTAGAATGCTGAAGGCTAAAGAGGCGGATTTATTGGTGCAGAACAAGGCTCTTTATGAAGATAAAGATCAATTATCTCAGAAAGAATATATTCGAGGAATCAGTGCCTGGAATTTTAACCTGGAGGATTTGAAAAGTCAAGCCGCTCTTATTCAAGATGATGACATACCTAATGCAGAAGAGCCACAAAGGGATAAGAAGCAAAAAGACAGATTGGACAACTTCAAAGTTTCTGCAGAGAGGCTATCAGCTGGAGCAGCTAATCATTCAGATGATGCACCCACGCAGGACAAGGAGGATGGATTCAACAATCTTCAGGATTTGGAGGGTTCACTTGTTTCATTTCCTACTAAACCTCTTCAAGCACTTAAAGGGTGCTTTGATATGTGTGAAGATGACATTAATAACAGCAGTCCAAGAGATTTGGATCATGATGGAAGAATTGACAATGAAAGCTCTAGGCCAAGTACTTCATTACAACAAAATACTACCAGTCAGCAAAAAAAGTTTCCAAGTGGTTCTTTACTACCTGATAATTTTCTTTTTCCCAAAATGGTTGTTACTGATGGGGACAGGGATTATCTACAAACAAAGTATTCTTCAGAGAGGAATCACAGTGGTCCATTGCAATATCGGCAGAAAAGAGACACCAACAACCTTCCACTGGTTGATGACACATCGGATGGAGCATTTTTCCGGCGTAGGGGGCGGTTCACATTGACAGATCTCAGTCCAATGGGTCCTTCAAACAGCACATCTGGCCCAGTTGTTAGTCCTACCAGTCCACCAAATCAAAATTTCATGTCTACCGCTATTCTTCCATCACTGCAGTGCATCTTGCAACATAATGGTTTGCAGAGGGAAGAGATTATTAAATTAATAAAGTATGCCGAACAATCTTCTGGCAAGAATACAGAATCAGTAGAGGCAGGGACAGGTGATATGTTGCAGGCACCACCTGCAACAACTAGGGAGCGAGAGCTGCATTTTCAGGTGATTCAACTCCAACAGAGCATTGGAAGCCTTGTTGAGGAATTGCAAAGACAAAAGATGAAAAATGTTCAGTTGGAAAAACAGTTGAACAGTATGGCTAACAGAGTGGAAAAGTGA 2010 0.3896 MEHVLEKRFPLNAEDYTLYEEVGEGVSASVYRALCVPLNEIVAIKVLDLEKCNNDLDGIRREVQTMNLIDYPNVLRAHCSFTAGHNLWVVMPYMAGGSCLHIMKSNYPEGFEEPVIATLLHEVLKALVYLHAHGHIHRDVKAGNILLDSNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKKFSKAFKELVATCLVKDPKKRPSSEKLLKHHFFKQARASKYLARTILEGLAPLGDRFRMLKAKEADLLVQNKALYEDKDQLSQKEYIRGISAWNFNLEDLKSQAALIQDDDIPNAEEPQRDKKQKDRLDNFKVSAERLSAGAANHSDDAPTQDKEDGFNNLQDLEGSLVSFPTKPLQALKGCFDMCEDDINNSSPRDLDHDGRIDNESSRPSTSLQQNTTSQQKKFPSGSLLPDNFLFPKMVVTDGDRDYLQTKYSSERNHSGPLQYRQKRDTNNLPLVDDTSDGAFFRRRGRFTLTDLSPMGPSNSTSGPVVSPTSPPNQNFMSTAILPSLQCILQHNGLQREEIIKLIKYAEQSSGKNTESVEAGTGDMLQAPPATTRERELHFQVIQLQQSIGSLVEELQRQKMKNVQLEKQLNSMANRVEK 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00066 669 MobiDBLite consensus disorder prediction 352 404 - -
Gma05g00066 669 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Gma05g00066 669 MobiDBLite consensus disorder prediction 452 473 - -
Gma05g00066 669 Coils Coil 639 669 - -
Gma05g00066 669 MobiDBLite consensus disorder prediction 541 561 - -
Gma05g00066 669 SUPERFAMILY Protein kinase-like (PK-like) 13 278 IPR011009 -
Gma05g00066 669 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00066 669 MobiDBLite consensus disorder prediction 543 561 - -
Gma05g00066 669 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00066 669 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 666 - -
Gma05g00066 669 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 666 - -
Gma05g00066 669 MobiDBLite consensus disorder prediction 437 476 - -
Gma05g00066 669 MobiDBLite consensus disorder prediction 437 451 - -
Gma05g00066 669 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00066 669 CDD STKc_OSR1_SPAK 14 277 - -
Gma05g00066 669 MobiDBLite consensus disorder prediction 357 377 - -
Gma05g00066 669 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Gma05g00066 669 Gene3D Transferase(Phosphotransferase) domain 1 97 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00066 Gma-Chr5 626334 633466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00066 1 666 MAP Kinase Kinase Kinase Kinase AT5G14720 65.939 0.0 913
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gma05g00066 Pkinase 3.9e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00066 K08835 - gmx:100784402 1336.63