Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00061 ATGGACAAAAAACCATGCAACTCATCATCTCATGATCCTGAAGTGAGAAAGGGACCATGGACCATGGAAGAAGACTTGATCTTGATAAACTATATTGCAAATCACGGTGAAGGTGTTTGGAACTCCTTAGCCAAAGCTTCTGgtctcaaacgaacgggaaagagttgtcgactccgttggCTAAACTACCTTCGTCCTGATGTTAGAAGAGGAAACATTACACCCGAGGAACAGCTTTTGATCATAGAACTTCATGCAAAGTGGGGCAATAGGTGGTCCAAAATTGCAAAGCATCTTCCAGGAAGAACTGACAATGAGATTAAGAACTTCTGGAGAACAAGGATCCAAAAGCACATTAAGCAAGCTGAGACTTCACAACAACATGGTAATTCAGAGAATAATGATCATCAAGCAAGCACTAGTACTAGCAAAGTGTCCACCATGGCACATCCAAATGAGACTTTCTCTCCACCCTCATACCAAGGAACTTTTGAGCCATTCCAACCTCAATTCCCTACAATCACTGATCAATCAAGTTGTTGTACCACCACCAACGACAACAACAACTATTGGAGCATCGAGGATATCTGGTCGTCTATGCAATTACTCAATGGAGATTAA 621 0.3897 MDKKPCNSSSHDPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKASGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIIELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKHIKQAETSQQHGNSENNDHQASTSTSKVSTMAHPNETFSPPSYQGTFEPFQPQFPTITDQSSCCTTTNDNNNYWSIEDIWSSMQLLNGD 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00061 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
Gma05g00061 206 MobiDBLite consensus disorder prediction 120 151 - -
Gma05g00061 206 CDD SANT 74 113 IPR001005 -
Gma05g00061 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 64 IPR017930 -
Gma05g00061 206 SMART sant 69 117 IPR001005 -
Gma05g00061 206 SMART sant 16 66 IPR001005 -
Gma05g00061 206 Gene3D - 17 69 - -
Gma05g00061 206 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 203 IPR044676 GO:0003700|GO:0006355|GO:0043565
Gma05g00061 206 CDD SANT 19 64 IPR001005 -
Gma05g00061 206 SUPERFAMILY Homeodomain-like 14 111 IPR009057 -
Gma05g00061 206 Gene3D - 74 146 - -
Gma05g00061 206 PANTHER TRANSCRIPTION FACTOR MYB21-RELATED 1 203 - -
Gma05g00061 206 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Gma05g00061 206 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Gma05g00061 206 Pfam Myb-like DNA-binding domain 70 113 IPR001005 -
Gma05g00061 206 MobiDBLite consensus disorder prediction 122 151 - -
Gma05g00061 206 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00061 Gma-Chr5 567318 570129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00061 15 206 MYB Transcription Factor Family AT3G01530 60.513 6.13e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma05g00061 Myb_DNA-binding 2.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00061 K09422 - gmx:100305972 439.113