Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00033 ATGGAAAAAGAGGTTGTGGAAAACCTTTGGAACGGTGATAGAGATTCTCAAATTCAAGCAGCTTTGGAACTGGGTAGATTAAGCAGGAAGCAGAGGCACAAGTTGGAAGAGAGTGGTGTTATGGTTCCTCTTGTTTCCATGCTTCATTCTCAAGACTATGAAGCCATAGAAGCTGCTTTGTGTGCCTTGCTCAGCCTTTCCTTTGGCAGTGAAAGAAATAAGATTCGGATCATCAAATCTGGAGCTTTGCCAGTTCTGGCAAATAAGGTAGCAATTGCTTCATCTGGGGCTATCCAACTCTTGGCTGAATTTGTCAACAGCAATTGTAGCACTCAGTCTCAGCTTGATGCTATAGCTACTCTACACAACCTCACAACCTGCAAAGAGATTATGCCATTGATTGTCTCTTCTGGTGTTATGTTCTCCTTGCTTGAACTGATCCACAGCACAGTAAAATCATCTCCATTGGTTGAGAAAGCAATTGAGTTGCTAGAGAACATTGTGTCTTCATCAGAGAGTGCACTTTGTAAGGCTGCTGGTGCTGGTGGAGCGATCGGGATACTAGTCGAGACTATTGAAGATGGATCTTTACTAAGCAAAGAGCATGCAGTGAGTATACTTTTACTTATATGCCAGAGCTGCAGAGAGAAATATAGAGGGTTGATTTTGACAGAGGGAGTGATGCCAGGATTGCTTCAGTTAAGTGTGGATGGAACATGGAGAGCCAAATCCATCGCTCAAGAACTGTTGTTGCTTCTGAGGGACTGCTCCAATTATGGCTCAAGATGTAAACAAATCAATCATGAGCTTATAGAACGGATAATGGAAGAAATTGAAGCAGAAGGAGAGAAATTGGCAGATACTACTTTAAGGTTGGTAGAGGAAATGATTGCAAAGCTCAATGCTTAA 909 0.4235 MEKEVVENLWNGDRDSQIQAALELGRLSRKQRHKLEESGVMVPLVSMLHSQDYEAIEAALCALLSLSFGSERNKIRIIKSGALPVLANKVAIASSGAIQLLAEFVNSNCSTQSQLDAIATLHNLTTCKEIMPLIVSSGVMFSLLELIHSTVKSSPLVEKAIELLENIVSSSESALCKAAGAGGAIGILVETIEDGSLLSKEHAVSILLLICQSCREKYRGLILTEGVMPGLLQLSVDGTWRAKSIAQELLLLLRDCSNYGSRCKQINHELIERIMEEIEAEGEKLADTTLRLVEEMIAKLNA 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00033 302 Gene3D - 1 87 IPR011989 -
Gma05g00033 302 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 87 - -
Gma05g00033 302 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 87 282 - -
Gma05g00033 302 SMART arm_5 28 68 IPR000225 GO:0005515
Gma05g00033 302 SMART arm_5 127 169 IPR000225 GO:0005515
Gma05g00033 302 SMART arm_5 84 126 IPR000225 GO:0005515
Gma05g00033 302 Gene3D - 88 176 IPR011989 -
Gma05g00033 302 SUPERFAMILY ARM repeat 4 284 IPR016024 -
Gma05g00033 302 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 39 81 IPR000225 GO:0005515
Gma05g00033 302 Gene3D - 177 285 IPR011989 -
Gma05g00033 302 PANTHER U BOX DOMAIN-CONTAINING 1 87 - -
Gma05g00033 302 PANTHER U BOX DOMAIN-CONTAINING 87 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00033 Gma-Chr5 245733 247261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00033 3 255 U-box Gene Family AT2G23140 32.270 9.20e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00033 - - gmx:100778534 529.25