Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00013 ATGAACTGCTTATACCCCGGAAAAGGCATATATAATGATTTGAACATTAGATTCGAGCCGCGGCGCACCATCGCAAGGTTTTCTTCTTCTTCTTCTTCCTCTCCTTCACGCCTTTTTTCAATTGCTTCTTGCAGGATTCCTGCAAGTACTGCTGTAGCAGATTCCAAGAACATTGGTGCTGGAAATAGTGATGATGCCTTCTATCGGTATAAGATGCCTAAAATGATTACCAAGATTGAGGGTAGAGGGAATGGCATCAAAACAAATATTGTCAACATGGTTGACATTGCCAAGGCATTGGCAAGGCCACCCTCTTACACAACCAAGTACTTTGGTTGCGAACTTGGGGCACAGTCTAAATTTGATGAGAAAGTTGGGACTTCTCATGTTAATGGGGCACATGACACTGCAAAACTTGCAGCTCTTCTTGAGATCTTTATCAAGAAATACGTCCAGTGTTATGGTTGTGGAAACCCTGAAACTGAGATATTGATTACTAAGAACCAAATGATCCAGCTGAAATGCGCTGCTTGTGGTTTTGTGTCAGATGTGGATATGAGAGACAAGCTGACTAGCTTTATTATTAAAAACCCTCCTGAAACAAAGAAAGGATCCAAAGACAAGAAGGCTATGAGGAGAGCCGAGAAGGAGAGACTGAAGGAAGGTGCAGCAGCTGACGAGGAACAAAAGAAAATGAAGAAAGAGACTAAGAAGAAAAGCTCGTCCACTTCCAAGGATGAGACCACAAAGTTGACCTCTACAAAGAAGAAAGCCAGTGGCTCTGATGAAGATCATCGATCTCCAGCTCACAGTCAAGTTGATGAGAAAGAAGAGGCTCCTGATGAAGATGATGATGATGGTGAAGTGCAGTGGCTAACAGATACGTCATTAGAGGCTGCTCAGCAGCGTATCCAAGAACAGCTAAGTGCCGTAACAGCTGATATGGTCATGCTCTCCACAGATGAGCCAGAGAAGAAGGAAAAAGCATCAAGTAAGACAAGTGATGGTTCTGAAAATGGTAATGCGATGCACTACAGGAAACTGGTTGGAGAAGTGAAAGCAATCTTGAACAAAGGTGTTGTGGCGAGTGAATTGCAGTCCCATATGGAAGCAATTCCAGCACCAGCTCAAGAAAAGATCAGTGCTCTGATTGAGGCCTTATTTGAGGGTATTGAGAAAGGGTTTGCAAAAGAAGTGGTCAAGAAGAAGCGCTACCTTGCTGCTGCAGTTTCCATGGAGGAGGGATCACATTTGCTATTGCTTCATGCAATTGAGGCTTTCTGTCTAAAGTCCACTTCCAATGCTTTGAAGGAAATTCCCATTGTTTTGAAGGCACTTTATGATTCTGATCTGTTGGAGGAAGAGCACATCGTGCAGTGGTATCAAGAAGGGCTGAATGGCGACAACAAGGACTCTCAGATATGGAAGAAGGCCAAACCTTTGATTGAATGGCTTCAAAGTGCGGAATCAGAAACAGAGGAAGAGTAA 1488 0.4355 MNCLYPGKGIYNDLNIRFEPRRTIARFSSSSSSSPSRLFSIASCRIPASTAVADSKNIGAGNSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPPSYTTKYFGCELGAQSKFDEKVGTSHVNGAHDTAKLAALLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTSFIIKNPPETKKGSKDKKAMRRAEKERLKEGAAADEEQKKMKKETKKKSSSTSKDETTKLTSTKKKASGSDEDHRSPAHSQVDEKEEAPDEDDDDGEVQWLTDTSLEAAQQRIQEQLSAVTADMVMLSTDEPEKKEKASSKTSDGSENGNAMHYRKLVGEVKAILNKGVVASELQSHMEAIPAPAQEKISALIEALFEGIEKGFAKEVVKKKRYLAAAVSMEEGSHLLLLHAIEAFCLKSTSNALKEIPIVLKALYDSDLLEEEHIVQWYQEGLNGDNKDSQIWKKAKPLIEWLQSAESETEEE 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00013 495 SMART 542_3 403 491 IPR003307 GO:0005515
Gma05g00013 495 CDD W2_eIF5 378 493 - -
Gma05g00013 495 Gene3D - 342 486 - -
Gma05g00013 495 Pfam eIF4-gamma/eIF5/eIF2-epsilon 418 495 IPR003307 GO:0005515
Gma05g00013 495 ProSiteProfiles W2 domain profile. 338 495 IPR003307 GO:0005515
Gma05g00013 495 MobiDBLite consensus disorder prediction 195 288 - -
Gma05g00013 495 Pfam Domain found in IF2B/IF5 63 179 IPR002735 GO:0003743|GO:0006413
Gma05g00013 495 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 150 185 IPR016190 GO:0003743|GO:0006413
Gma05g00013 495 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 56 495 - -
Gma05g00013 495 MobiDBLite consensus disorder prediction 200 276 - -
Gma05g00013 495 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 62 153 IPR016189 GO:0003743|GO:0006413
Gma05g00013 495 Gene3D - 157 197 - -
Gma05g00013 495 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 56 495 IPR045196 GO:0003743|GO:0006413
Gma05g00013 495 MobiDBLite consensus disorder prediction 320 341 - -
Gma05g00013 495 SUPERFAMILY ARM repeat 348 489 IPR016024 -
Gma05g00013 495 Gene3D - 49 156 - -
Gma05g00013 495 SMART eIF2Bneu4 67 181 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00013 Gma-Chr5 96266 98536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00013 56 488 Eukaryotic Initiation Factors Gene Family AT1G77840 60.948 9.14e-173 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00013 K03262 - gmx:100796565 806.208