Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02454 atgatctcccaaataaatggcaccaatgcaattcgaggatattgcatagatatattcctagctgcctttaaattgcttccctatgcagttcaatacaagttcattctgtttggagatggacacaagaacccaagctactgtgatcttgtcaaaatgattacttctgatgtttttgatactgccatagttcagaaagaaggccattgtcacgcgttgcttaagtctccaagcggtactgtttcagaaattcccgaccatacgcaaattgagatcaacaagaagcagaagaaaaaggaagcaccaaccatatattatgcctcgagaacgcactcacaaatttctcaagtggttcgtgaattgcggaaaactgcatacagggtgcctatggctgtgttgGCATGGCGGAAACACTGCTGCACAACTAAAAATATAATTGGCAAAGAGAACATCTATGATGAATGTAAACTATTATTGAAAGATCAGGCAACAGGGTTCAAAGGTCATCCTTCCCTTCAGAAAGGAGGATGCAATGTGGTGCATGACATAGAAGATCTTGTAAAAGTTGGACAATTGGTTGCTGTTCGTGCTCGTTCTATGTCAAATGATGCTCAATTGGTATTTTGTCCATATAACTACATCAATAATCCAGTCATTTGGGCACCAATGGAAGTGGATATTAAAATAATATATGGATTCCGGATGTCTTTCACAAACCATCAGTTGCATGCTATCCAATGTTGCAGCAATATGGAGGACATTACTCGTGATGCTAGCAGTGTGGATAATGAAGAAGATGTTTTGGATAGTATGTTATGA 816 0.1961 MISQINGTNAIRGYCIDIFLAAFKLLPYAVQYKFILFGDGHKNPSYCDLVKMITSDVFDTAIVQKEGHCHALLKSPSGTVSEIPDHTQIEINKKQKKKEAPTIYYASRTHSQISQVVRELRKTAYRVPMAVLAWRKHCCTTKNIIGKENIYDECKLLLKDQATGFKGHPSLQKGGCNVVHDIEDLVKVGQLVAVRARSMSNDAQLVFCPYNYINNPVIWAPMEVDIKIIYGFRMSFTNHQLHAIQCCSNMEDITRDASSVDNEEDVLDSML 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02454 271 Pfam DEAD_2 105 223 IPR010614 GO:0003677|GO:0003678|GO:0005524
Gma04g02454 271 Gene3D - 58 230 IPR027417 -
Gma04g02454 271 PANTHER FANCONI ANEMIA GROUP J PROTEIN 91 266 - -
Gma04g02454 271 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 91 266 IPR045028 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02454 Gma-Chr4 54949325 54953944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02454 1 62 Ion Channels AT1G42540 53.968 1.61e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02454 K15362 - gmx:100779610 250.366