Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02434 ATGGATTCAGGTCCTCCGGCGAACGATTTGTGTTCAGTGTGCCATGGCAACTTTCATATTCCATGCCAAGCCAATTGTTCTCACTGGTTTTGCGGAAATTGCATAATGCTTGTGTGGCAGCACGGATCAGTGGGTTGTTCATGCAAGTGCCCACTGTGTCGTCGAGCCATCAGTCTCTTAGTCCCCACAGAAGAGTCTCTGAGGCAACAGCAGGACCCCGAAGTTTCCCAGATTCTGTCAAAGATTCATGCCTATAACCGTTTCTTCGGTGGCCAACCCACCACTCTCTATCAGAGACTGCGAGATCTTCCCTTTCTCTTGCACAGGCTGCTCAGGGAATTCCTCCACCCTCACAGATCCCTTCCTCTTCTCATTCGCGCTCGCGTCTTTGTTGTTATGATAGCGAGTGTTATATACCTCTTCAGCCCTATTGACATCATTCCTGAAGGGATATTAGGAGTAGTTGGTTTCTTAGATGATCTCCTAATTGTGCTCATCTGCTTCCTACATGTTGCTGCCCTTTATAGATCAGTACTCTACCTCCGTCATGGGGGTTCCTGA 561 0.4848 MDSGPPANDLCSVCHGNFHIPCQANCSHWFCGNCIMLVWQHGSVGCSCKCPLCRRAISLLVPTEESLRQQQDPEVSQILSKIHAYNRFFGGQPTTLYQRLRDLPFLLHRLLREFLHPHRSLPLLIRARVFVVMIASVIYLFSPIDIIPEGILGVVGFLDDLLIVLICFLHVAALYRSVLYLRHGGS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02434 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 95 IPR013083 -
Gma04g02434 186 Pfam Protein of unknown function (DUF1232) 131 165 IPR010652 -
Gma04g02434 186 ProSitePatterns Zinc finger RING-type signature. 26 35 IPR017907 -
Gma04g02434 186 SUPERFAMILY RING/U-box 9 61 - -
Gma04g02434 186 ProSiteProfiles Zinc finger RING-type profile. 11 54 IPR001841 -
Gma04g02434 186 PANTHER BNAC07G13660D PROTEIN 6 186 - -
Gma04g02434 186 PANTHER UNCHARACTERIZED 6 186 IPR038896 GO:0061630
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02434 36 186 C3H Transcription Factor Family AT1G72175 66.225 4.27e-61 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02434 K15707 - gmx:100306204 370.933