Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02420 ATGCATTACCTATCTCGGATTTTTGAGCCCAGGAAACAAACCAAGACCATGGATCGCAAGAACCCGCGGAGGAAGCCCAAGCTCGAGCGCCGTAACGCTCTTAAATACTCCTCCTCCGAATACGACGTCGTATCCTCCCCCTCCGACGACACGCTCTACACGCGCTCCATGGAGTTCTACGACCGCACGAGCTTCCGAATCGAGGGCGTCGAGGGCGAGTTCGATCGAATTTGCCGCAGTTTGGGCCTCTCCGGCCCAGAGGACTTTGCTATTCCCGCTGCGGCGTGGGAGGCCATGAAGTTTCGCTCCTCTTCGGATATTCTCCCGAGACTGAAGCTCGATAACCTCGATATTCCCGAGGAAGACGTAGAAGAAGAATCGAAGGTTAACGAGGTGAGAATGTTCAAATCAGCAGAGGAAGGCGAATTGAGTGAAAATCACGGAGTTAGTGATAGTGTTAGGGTCAGGGAGATAGATGAATCGAGCAATGGCATTAAGGGGATTCGGCCACCGATGCTGAAGCCTCCGCCGGGAACGAGGGTTCAGGTGGTGGATGATAGCGCGTGTTCCTCGTGGGACCTCTTGAGGGACTTGGCTCCTCAAGGGGGAGAAGGGTTACCGTTGAACCATTCCAATGAAGAGAGGGAAGTGGCGGAGAAGGAAGAAGGGGAAGTTGGTACTAAAGAGAGTCCGAAGAGAGAAGAGGAACAGAATGTGGATAATGCGGCGAGGATTGCGGAGATTGTGGCGGGGCTTTCGGAGTCGTGTTCGTTTTCTACTTCGAACGAAGACGATTCTTCGAGTAGTACCACGGACCCTAGGTCTAATAATATTTCTCCGCAAGGGAGAATCAAACGGATTATTACCGCCGGAAGCTGGCAGAAGGGTGAGTTTCTCGGGGGTGGCTCCTTTGGCTCCGTTTATGAAGGAATTTCTGATGATGGATTCTTTTTCGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGGACTCAGGGAAAACAAAGTGTATATCAATTGGAGCAGGAAATAGCACTTTTGAGTCAGTTTGAGCATGACAATATTGTTCAATACTATGGCACAGAAATGGATCAATCAAAGTTGTATATCTTTCTTGAGCTTGTAACGAAAGGTTCCCTTAGAAGCCTCTATCAGAAGTATACTCTTCGAGATTCCCAAGTATCTGCCTATACGAGACAGATTCTGCATGGTTTGAAGTATCTTCATGATCGAAATGTGGTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAGTGGATCTGTCAAGCTTGCAGATTTTGGATTGGCAAAGGCAACCAAATTGAATGACGTTAAATCAATGAAGGGCACAGCATTCTGGATGGCGCCTGAGGTTGTAAAAGGAAAGAACAAGGGTTATGGGCTTCCAGCTGATATGTGGAGTCTGGGATGCACTGTACTGGAGATGTTAACAGGCCAACTTCCGTACCGTGATTTAGAATGTATGCAGGCATTATTTAGAATTGGAAAAGGGTTAAACTATGAAACATTATGGAGTTCTGTCTTTCATTGCATCATTCAGAGTTCGCTTGCCTGTAACTTATATCAGTTTTTCAGCACGGCTTTGGATCTAACACGTCATATGGCACTCCAGAGAACCAAGTTATCCACTAGGCAATATCCTATTGGAGAATTATGCTCAAATTCCAGTTCCAGTTTCAGGTTCAGTTTGTTGATGGCTAAAGTTGGTAAGTTGCGGAGCAAGGCTCGAGGTCACAGGGCAAGCCCACATCTTTTGTCTTGTGGAAGAAAAAATCTGAAAGATGTTAATGTTAGGAAGAGCTCTTCTAAAGCATTGGAGAAGAAAGATTGGGAAGATGCAACCTGCTCAGTCTGTATGGAGGTCCCCCACAATGCTATCCTTCTCCTTTGTTCATCTTATGATAAGGGTTGTCGCCCATACATGTGTGCCACTAGTCATCGCCATTCAAACTGTTTTGAACAATACAAAAAGACATATACGAAAGCAACTTCTGTTCAAAGCTTGCAGCTAGAAGCAAACAATTCCAATATTGATTTAAGCACAGGTGAACCTAAAGACGATACTGAAGTTCCTGAGCTTCTTTGCCCCCTTTGTCGCCGGCAGGTGAAAGGTTGGACAGTGGTTGAAGTGGCACGGAAGTGTCTGAATGCGAAGAAAAGAAGTTGCATGCAAGATGATTGCTCTTTTGTGGGGAATTACAAGGAGCTTAGGAAGCATGTTAGGTCTAAGCATCCATTTGCACGACCACGAGAAGTGGACCCACTAAAAGAAGAAAAATGGAAGAGATTTGAGTGTGAAAGAGAACGGAATGATGTGATTAGCACAATTTTATCTTCAACACCAGGGGCAATGGTACTTGGGGATTATGTGCTGGAGCCAAATGACCATGCTTTTTATAGTGACGAGTATGATTCTGATGAGGAATATCTAGAGGATGATTTCTTCTCGAGTGTTGCATCTACAGGTTCTGCGGCTGTCTCTGGACGCGGACTCCACAGGATATTGTTAGGAAGGTCTAGAAGACGACGGAGGCATAGGATAGCAAATGCAAGAAGGTCTAGGAGATGCAGTTCATTATGA 2607 0.4588 MHYLSRIFEPRKQTKTMDRKNPRRKPKLERRNALKYSSSEYDVVSSPSDDTLYTRSMEFYDRTSFRIEGVEGEFDRICRSLGLSGPEDFAIPAAAWEAMKFRSSSDILPRLKLDNLDIPEEDVEEESKVNEVRMFKSAEEGELSENHGVSDSVRVREIDESSNGIKGIRPPMLKPPPGTRVQVVDDSACSSWDLLRDLAPQGGEGLPLNHSNEEREVAEKEEGEVGTKESPKREEEQNVDNAARIAEIVAGLSESCSFSTSNEDDSSSSTTDPRSNNISPQGRIKRIITAGSWQKGEFLGGGSFGSVYEGISDDGFFFAVKEVSLLDQGTQGKQSVYQLEQEIALLSQFEHDNIVQYYGTEMDQSKLYIFLELVTKGSLRSLYQKYTLRDSQVSAYTRQILHGLKYLHDRNVVHRDIKCANILVDASGSVKLADFGLAKATKLNDVKSMKGTAFWMAPEVVKGKNKGYGLPADMWSLGCTVLEMLTGQLPYRDLECMQALFRIGKGLNYETLWSSVFHCIIQSSLACNLYQFFSTALDLTRHMALQRTKLSTRQYPIGELCSNSSSSFRFSLLMAKVGKLRSKARGHRASPHLLSCGRKNLKDVNVRKSSSKALEKKDWEDATCSVCMEVPHNAILLLCSSYDKGCRPYMCATSHRHSNCFEQYKKTYTKATSVQSLQLEANNSNIDLSTGEPKDDTEVPELLCPLCRRQVKGWTVVEVARKCLNAKKRSCMQDDCSFVGNYKELRKHVRSKHPFARPREVDPLKEEKWKRFECERERNDVISTILSSTPGAMVLGDYVLEPNDHAFYSDEYDSDEEYLEDDFFSSVASTGSAAVSGRGLHRILLGRSRRRRRHRIANARRSRRCSSL 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02420 868 MobiDBLite consensus disorder prediction 209 240 - -
Gma04g02420 868 SMART serkin_6 293 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g02420 868 ProSiteProfiles Protein kinase domain profile. 293 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g02420 868 SUPERFAMILY Protein kinase-like (PK-like) 273 559 IPR011009 -
Gma04g02420 868 Gene3D Transferase(Phosphotransferase) domain 1 291 566 - -
Gma04g02420 868 Pfam Protein kinase domain 294 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g02420 868 MobiDBLite consensus disorder prediction 255 281 - -
Gma04g02420 868 MobiDBLite consensus disorder prediction 1 31 - -
Gma04g02420 868 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Gma04g02420 868 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 60 506 - -
Gma04g02420 868 MobiDBLite consensus disorder prediction 200 240 - -
Gma04g02420 868 MobiDBLite consensus disorder prediction 1 16 - -
Gma04g02420 868 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 60 506 - -
Gma04g02420 868 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Gma04g02420 868 MobiDBLite consensus disorder prediction 163 182 - -
Gma04g02420 868 Pfam Protein of unknown function (DUF1644) 620 783 IPR012866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02420 Gma-Chr4 54579126 54596068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02420 27 506 MAP Kinase Kinase Kinase AT4G08500 50.277 1.87e-140 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma04g02420 Pkinase 6.7e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02420 K13414 - gmx:100819999 958.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02420 04 54579126 54596068 Gma04g02420 04 54579126 54596068 ECH
Gma04g02420 04 54579126 54596068 Gma06g00973 06 9057452 9064759 GST