Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02414 ATGGATGGGAAGCCTAACCCGGATTCCTCCTCCACGGACCTCCTCCGCGACGTTCAAGCCGCCTTGAAACGACACCGTCCTCTCGGTACAATGCAGTCCAATTGCATAAGGCCAAAGCGCCCGCTACTTCCTCAAAGAGCATCAAACATTTCTTCTTCTTCCGATGCCACCAATTCTCAAGAGGAAGCTTCTTCCAAGGATTCGCTTATAACCGTCGTCCCTGCTCAAAACCTAGACGCTCAGAAGAAAGTCCAGTTTTCAGTTCGAAGCAACGCTGCCTTGCAGGATGGAAAGGCCACTGAGTTGGAGAATTTATCTTCTCACATGAGTTCGCTTGGATTCGCAGAAATGGAGTGGGTTGAAGGCAGTCAAATTGAATCATCCTCATCGTCGTCGCTTGGATGCATCCAGCTGGAGAATGTTCCGCAGGCAGCGTTTGACGCGAGTTTGAAATGTGAAAGTGGAGTGAGTTCCGTGCTACCGAAGAGAAGTTTGGTTACCCAGGATCATTTGCAGCAATTCAGAAGTTTTTTGAGTCAGCCCGCGACACAATCTTCGGTGGTGGGACCTTCTTGTGCTACAACTACCTCGGTTCATTCAACTTCTGCACCAATGCTAAATTCAGCAACACGATATTCTCATTTGCGTCAAGATGGTGGCTCAAGTGTGGCTGCTGAGCCTTTGGGGGAGGTTAATGCTAATCCTTGTCCTATAACTGAAGGGGTTGTGAAATCGGTTGATGTTTCCATAAAAGAAACGAATAGAATGTCGGTTGATCGGGGGGCAGAAGCTGAAGTCCGAGCTTCCGGTTCTTGTATTGATGATGCAGGGTTGTTATCTAAGGGGAGCAATCGATCTAAGGAGCAACAAGGGGGTGTGTTGAAGGAATCTGGCAATTCTAAATATACTTCTTGTGATGATGCGAAAGGGAAAGAGGCTGTGGATGTTGTCACTGTACAAACACAGGCTCCACTTCCCACAACCATAACCTCATCTTCAGATATGAAGTTGGGGTCTTCTAAGGAGGAAAAACGTGAGAAGACTGCAAGTAGTAAAGGTGCATCGGGTACCCGGAAAAGAACTTATGACCCTGATTTGTTTTTCAAAGTCAACGGCAAGCTTTATCAGCGTCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTGCACAAAGTGATCTCATCGGACTGTAGGATATATGCACTTAAAAAGATCAAGCTCAAGGGACGTGATTATGCTACTGCATATGGGTTTTGTCAAGAAATTGAGTATCTAAATAGGCTGAAGGGAAAGGATAACATCATACAGCTTATAGATTATGAGGTGACTGACAAGGCTTTACTTGAGGAAGTTATGAAAGGCTCCTTCAGTAATAAGGATGGCAGGGTCAAGGATGATGGATGTATATACATGGTGCTTGAATATGGGGAAATCGATTTGGCTCACATGTTGTCTCAGAAGTGGAAGGAACTGGATGGAAACAACAAAACTATAGACGAGAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCTAGCTGTCAACACTATTCATGAGGAACGAATTGTGCACTCAGACTTGAAGCCAGCTAACTTCCTCCTTGTCAAAGGTTCCCTAAAACTGATTGATTTTGGTATAGCCAAAGCAATAATGAGTGACACAACCAACATCCAACGGGATTCACAGGTGGGCACTCTAAGTTACATGTCTCCAGAAGCATTTTTGTGTAACGAGACTGATGCGAATGGAAACATCATAAAGTGTGGCCGACCATCAGATATCTGGTCCCTGGGCTGCATCCTTTATCAAATGGTATATGGGAGGACACCTTTTTCTGATTACAAGACATTTTGGGCGAAATTCAAAGTTATAACAGATCCAAATCATAAAATTACGTATGAACCAGTTTCAAACCCATGGCTTTTGGATCTTATGAAGAGGTGTCTAGCATGGGATCGCAATCAAAGGTGGAGAATTCCTCAGCTACTCCAACATCCTTTTCTTGTTCCTCCTGTACCATCTAATCCATCTTTGCCCCAAGATCATACCTGTAAATTGCTACAACTTATTTCTGAAACTTGTACATATGACCCTGAAGCAACCCAACTGTGTAGTCAGCTCCAACGGCTTCTTAGTGACCCACTTGAGAAAACAACTTGCTCACTATATTCACGAGATCAACAGCTAAAACTGCTGTCCCAAATGTCAGAACTCTGTATTCAGCTGCACGAACGTTTGACAAATATTGAAAACAAGTAG 2259 0.4431 MDGKPNPDSSSTDLLRDVQAALKRHRPLGTMQSNCIRPKRPLLPQRASNISSSSDATNSQEEASSKDSLITVVPAQNLDAQKKVQFSVRSNAALQDGKATELENLSSHMSSLGFAEMEWVEGSQIESSSSSSLGCIQLENVPQAAFDASLKCESGVSSVLPKRSLVTQDHLQQFRSFLSQPATQSSVVGPSCATTTSVHSTSAPMLNSATRYSHLRQDGGSSVAAEPLGEVNANPCPITEGVVKSVDVSIKETNRMSVDRGAEAEVRASGSCIDDAGLLSKGSNRSKEQQGGVLKESGNSKYTSCDDAKGKEAVDVVTVQTQAPLPTTITSSSDMKLGSSKEEKREKTASSKGASGTRKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCRIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALLEEVMKGSFSNKDGRVKDDGCIYMVLEYGEIDLAHMLSQKWKELDGNNKTIDENWLRFYWQQILLAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFLCNETDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSDYKTFWAKFKVITDPNHKITYEPVSNPWLLDLMKRCLAWDRNQRWRIPQLLQHPFLVPPVPSNPSLPQDHTCKLLQLISETCTYDPEATQLCSQLQRLLSDPLEKTTCSLYSRDQQLKLLSQMSELCIQLHERLTNIENK 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02414 752 MobiDBLite consensus disorder prediction 325 358 - -
Gma04g02414 752 SUPERFAMILY Protein kinase-like (PK-like) 369 678 IPR011009 -
Gma04g02414 752 MobiDBLite consensus disorder prediction 337 358 - -
Gma04g02414 752 ProSiteProfiles Protein kinase domain profile. 375 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g02414 752 PANTHER MIXED LINEAGE PROTEIN KINASE 6 721 - -
Gma04g02414 752 Gene3D Transferase(Phosphotransferase) domain 1 489 671 - -
Gma04g02414 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Gma04g02414 752 ProSitePatterns Protein kinases ATP-binding region signature. 381 403 IPR017441 GO:0005524
Gma04g02414 752 MobiDBLite consensus disorder prediction 275 305 - -
Gma04g02414 752 MobiDBLite consensus disorder prediction 282 304 - -
Gma04g02414 752 CDD PKc_Mps1 373 668 - -
Gma04g02414 752 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 6 721 IPR027084 GO:0004712|GO:0007093|GO:0051304
Gma04g02414 752 MobiDBLite consensus disorder prediction 23 68 - -
Gma04g02414 752 MobiDBLite consensus disorder prediction 45 68 - -
Gma04g02414 752 Gene3D Phosphorylase Kinase; domain 1 368 454 - -
Gma04g02414 752 Pfam Protein kinase domain 375 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g02414 752 SMART serkin_6 375 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02414 Gma-Chr4 54503075 54507546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02414 381 669 MAP Kinase Kinase Kinase AT4G08470 29.352 7.73e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Gma04g02414 Pkinase 1.1e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02414 K08866 - gmx:100788990 1462.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02414 04 54503075 54507546 Gma04g02414 04 54503075 54507546 ECH
Gma04g02414 04 54503075 54507546 Gma06g00982 06 9166138 9170682 GST