Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02397 ATGAGTGCCGAGAAGGTGAAACTGACTGGCAGATTACGCCTATTTTTCACTAATGCAAAACCATACATCTTAATGATTGGCTTGCAATTTGGCATGGCTGGAAATTACATCTTCGGCAAGGATGTTCTTAACCATGGCATGAGCCGTTTTGTGTTCATTGTTTACCGAAATGCTATGGCTACTATTGCCCTTGCCCCTTTTGCATTTTTTATTGAAAGGAAAAGTAGGCCTAAGATGACACTCCCAGTCTTTCTAcaaataatagtccttggattccttgaGCCAGTTTTTAACCAAAGCTTCAATTACTTGGGGATGAAGTATACTTCGGCTTCATTCACATCTACTATAGTGAATGCTGTGCCCTCTATTACCTTTGTGCTTGCAGTCTTCGTCCGGTTGGAGCATCTAAGACTTAGGGAGGTTCGGAGTCAAGCCAAAGTGATTGGAACATTAGTAACCTTTGGAGGTGCTTTGCTAATGGCAATTTACAAAGGTCCGGCATTCAACCTTTTTCAGTCTGGAAGCACAACCCATCATGAAAATGGAAGCACCTCCTCTCACAACAGCCACCAAACTGCTGGTGCTATTTATATACTAATGGGTTGTGTGGCTTTGTCGTCTTTCTACATTTTGCAGTCTATAACGGTAAAGAGATACCCAGCGGAGCTATCATTGGCAACGTTGATATGCCTGGCGGGAACAGTGGAAGCATCTGCAGTGGCATTTGTGGCTGAACGTCACTCCCGTGCTTGGGCTGTTGGTTGGGATTATAGGCTCTATGCTCCTTTTTACACGGGAGTAGTTAGTTCAGGAATTGCATACTATGTTCAAGGGCTGGTGATGAAACTAAGAGGCCCCGTATTTGCAACAGCCTTTAATCCTCTTTGCATGATCATTGTTGCTGCTTTGGGCTCCCTTATATTAGGAGAACTGCTCCATCTCGGAAGTATCATTGGAGGCATTGTAATCGCAGTGGGGCTTTACTCGGTTGTGTGGGGCAAAGCCAAAGATTATTCAGAACCCAAATTACCATCAACAGATGCAGAAGACACAGAATCACTGCCAATTACTGCAACTTCCAAAATTGATATTATTTCTGGGAATTTGGAAAAACAACCATCAACTGATCAGAAATTAGAGGAGACCAACAAAGTGGGGGAAGAAAAAGAGTTGAATGTTGTGAAGGTTTAA 1194 0.4229 MSAEKVKLTGRLRLFFTNAKPYILMIGLQFGMAGNYIFGKDVLNHGMSRFVFIVYRNAMATIALAPFAFFIERKSRPKMTLPVFLQIIVLGFLEPVFNQSFNYLGMKYTSASFTSTIVNAVPSITFVLAVFVRLEHLRLREVRSQAKVIGTLVTFGGALLMAIYKGPAFNLFQSGSTTHHENGSTSSHNSHQTAGAIYILMGCVALSSFYILQSITVKRYPAELSLATLICLAGTVEASAVAFVAERHSRAWAVGWDYRLYAPFYTGVVSSGIAYYVQGLVMKLRGPVFATAFNPLCMIIVAALGSLILGELLHLGSIIGGIVIAVGLYSVVWGKAKDYSEPKLPSTDAEDTESLPITATSKIDIISGNLEKQPSTDQKLEETNKVGEEKELNVVKV 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02397 397 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020|GO:0016021
Gma04g02397 397 Pfam EamA-like transporter family 20 161 IPR000620 GO:0016020|GO:0016021
Gma04g02397 397 PANTHER WAT1-RELATED PROTEIN 14 368 IPR030184 GO:0016021|GO:0022857
Gma04g02397 397 PANTHER WAT1-RELATED PROTEIN 14 368 - -
Gma04g02397 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 165 - -
Gma04g02397 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02397 Gma-Chr4 54352384 54357120 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02397 13 394 Nodulin-like Gene Family AT2G37460 48.042 7.31e-126 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02397 - - gmx:100786326 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02397 04 54352384 54357120 Gma04g02397 04 54352384 54357120 ECH