Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02372 ATGTCGGGTGAGGAGACACAGAGGAATGTGTTTGGCGCGGAAACGGCGTCGTCCTTGGTGAAGGAGCTGAGGGACAACTTCGGTAAAGGAACCACGCGAAGTTACGAATGGAGAGTGTCGCAAGTGAAGGCTCTATTGAAGGCGGTGGTTGAAAACGAGGACCAGATCGTCGGTGCTCTTTGTTCCGACCTAGCCAAGCCTCCGCTCGAAACCGTCGTCTACGAGATTGGTATGTTTAAAAACTCATGTGAAGTCATACTGAAGGAATTGAAACATTGGATGACGCCAGAAAAGGTTAAAACGTCAATCAGAACTTTTCCTTCTTCAGCTGAAATAGTACCTGAACCGCTGGGTGTCGTGTTAGTCATCTCTGCATGGAACTATCCAATCTTGTTGTCCCTTGATCCAGTAGTTGGAGCTATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTGCTCCGGCCACTTCATCAGTACTAGCAAAGTTGATAGAGAAGTATATGGATAACTCATTTGTAAGAGTTGTTGAGGGGGCAGTTGATGAAACAACTGCACTATTGCAGCAAAAGTGGAACAAGATTTTCTACACAGGTAATGGAAGAGTGGGAAAAATAGTGATGACTGCGGCTGCAAAACACCTTACACCAGTTGTACTGGAGCTTGGAGGAAAATCTCCTGTTGTTGTTGATTCAAACAACAATTTGCTGGTAGCAGCTAGACGAATAATTGCTGGCAAGTGGGGATTGAACAATGGACAAGCCTGCATTTCTCCCGATTATGTTATAACAACAAAAGACTATGCTCCCAAGTTGGTGGATACCCTAAAGACTGAATTGGAGTCATTTTATGGAAGGAACCCGTTGGAATCTGAAGATTTGTCTCGAATTGTGAGTTCCAACCACTTTGCTCGCTTGTCAAAGCTCTTGAATGATGATAAGGTTTCTGGCAAGATTGTTTATGGAGGCGAAAAGGATGAAAAGAAATTAAGGATTGCTCCCACTATTTTATTGGATGTTCCGCAAGATTCTTCGATAATGGGTGAGGAGATATTTGGTCCATTGCTTCCCATCATCACGGTCAATAAGCTCGAAGAAAGTATAGATGTGATCAACTCAGGAGCAAAGCCCCTCGCTGCATATGTATTTACAACCGACAACAAGTTCAAGGAGCAGTTCGTAAAGAATGTTTCTGCCGGGGGTTTGCTCGTCAATGACACTGCCTTACATCTTGTGGTTGATACCTTGCCATTTGGGGGAGTTGGGGAGAGTGGAATGGGTGCATACCATGGGAAGTTCTCTTTTGATGCTTTTACACACAAAAAAGCAGTTCTTTATCGCAGTTTTGCTGGGGATTCAGCAATAAGGTACCCACCATACACGGATACAAAACTGAGATTGATGAAGGCTCTCGTCGGTGGTCGTATCCTCGGAATAATTCGTGCTCTTTTCGGATGGTCCTAA 1467 0.4444 MSGEETQRNVFGAETASSLVKELRDNFGKGTTRSYEWRVSQVKALLKAVVENEDQIVGALCSDLAKPPLETVVYEIGMFKNSCEVILKELKHWMTPEKVKTSIRTFPSSAEIVPEPLGVVLVISAWNYPILLSLDPVVGAIAAGNAVVLKPSEIAPATSSVLAKLIEKYMDNSFVRVVEGAVDETTALLQQKWNKIFYTGNGRVGKIVMTAAAKHLTPVVLELGGKSPVVVDSNNNLLVAARRIIAGKWGLNNGQACISPDYVITTKDYAPKLVDTLKTELESFYGRNPLESEDLSRIVSSNHFARLSKLLNDDKVSGKIVYGGEKDEKKLRIAPTILLDVPQDSSIMGEEIFGPLLPIITVNKLEESIDVINSGAKPLAAYVFTTDNKFKEQFVKNVSAGGLLVNDTALHLVVDTLPFGGVGESGMGAYHGKFSFDAFTHKKAVLYRSFAGDSAIRYPPYTDTKLRLMKALVGGRILGIIRALFGWS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02372 488 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 221 228 IPR029510 GO:0016491
Gma04g02372 488 Pfam Aldehyde dehydrogenase family 13 445 IPR015590 GO:0016491
Gma04g02372 488 PANTHER ALDEHYDE DEHYDROGENASE 4 488 - -
Gma04g02372 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 225 425 IPR016163 GO:0016620
Gma04g02372 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 443 IPR016162 GO:0016491
Gma04g02372 488 SUPERFAMILY ALDH-like 19 459 IPR016161 GO:0016491
Gma04g02372 488 PANTHER ALDEHYDE DEHYDROGENASE 4 488 IPR012394 GO:0006081
Gma04g02372 488 PIRSF ALDH 3 483 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02372 Gma-Chr4 54116693 54122424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02372 76 486 Aldehyde Dehydrogenase Gene Family AT1G44170 71.046 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02372 K00128 - gmx:100803104 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02372 04 54116693 54122424 Gma06g01023 06 9557499 9560959 GST