Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02355 ATGTCGACCCAGAATCGTCGCTCGTCGTTTTCCTCCTCAACGACGTCGTCTTTGGCCAAACGCCATGCATCCGCCTCAACGACGTCGTCTTTGGCCGCCGCTCCTACAAACATGGCCAAGAAGCGGCCTCCTCTCTCCAACCTCACCAACACCGTTGCTCACCGCAACTCTTCCTCTTCGGTTCCATGCGCAGCTAAATTTGCCAAGACCAAGAAAGACGTTGTTCCGGCGTGTTCAGGGAACAAAAGGCCCACATTGGCGAATGTGAAACCCGCTAGCGCAGTTATTTTTCCGAAGGCTAATTCTTTCCCTGTAAAGAATGAAGCTCCACCAACTCCTCCTCCTCCAGTTGCCACCGTTACTGTTCCGGCTCCGGTGGTGGATGTTTCACCTAGTAAATCAGATACAATGTCCGTTTCTACGGATGAGTCAATGTCCTCTTGTGACTCCTTCAAGAGCCCTGACATTGAATATGTGGACAATAGTGATGTTGCAGCCGTTGATTCAATTGAGAGGAAAACATTCAGCCATCTCAACATCTCTGATTCTACAGAAGGGAACATATGTAGTAGAGAGATACTTGTTGAGTTGGAGAAGGGGGACAAATTTGTCAATGTTGATAATAATTACGCGGATCCTCAGCTCTGTGCAACCTTTGCTTGTGATATCTACAAGCACCTTCGTGCATCTGAGGCAAAGAAAAGGCCTTCCACAGACTTCATGGAGAAAATTCAGAAGGAGATAAACTCCAGCATGCGTGCTATATTGATTGACTGGCTTGTCGAGGTGGCTGAAGAGTATAGACTAGTACCTGATACATTGTATTTGACAGTAAACTACATTGATCGGTATCTATCAGGGAATGTGATGAACAGACAAAGGTTACAGTTACTTGGTGTTGCCTCCATGATGATTGCCTCTAAATACGAGGAAATTTGTGCACCTCAGGTGGAGGAATTTTGTTACATAACTGATAACACATACTTCAAAGAAGAGGTTTTGCAGATGGAATCTGCTGTCCTGAATTTTCTCAAGTTCGAAATGACAGCCCCAACAGTAAAATGTTTCTTAAGGTATATTGCCCCCCTTTTTTTTCCCGTGGTTTTTCAGGTCCCTTCGCTACAACTAGAGTGCTTGACAAACTATATTGCTGAATTGTCTCTCATGGAGTACAGTATGCTTGGTTATGCTCCATCACTTGTAGCCGCTTCAGCAATTTTCCTGGCCAAATTCATACTTTTCCCTTCAAAGAAACCATGGAATTCCACATTACAGCATTACACCTTGTACCAGCCTTCTGATCTGTGTGTCTGCGTAAAGGATCTTCACCGTCTTTGTTGCAACAGCCCTAATTCTAATTTGCCTGCAATTAGGGAGAAATACAGTCAGCACAAGTACAAATATGTGGCCAAGAAGTACTGCCCTCCTTCAATACCCCCAGAATTTTTTCAGAATTGA 1458 0.4472 MSTQNRRSSFSSSTTSSLAKRHASASTTSSLAAAPTNMAKKRPPLSNLTNTVAHRNSSSSVPCAAKFAKTKKDVVPACSGNKRPTLANVKPASAVIFPKANSFPVKNEAPPTPPPPVATVTVPAPVVDVSPSKSDTMSVSTDESMSSCDSFKSPDIEYVDNSDVAAVDSIERKTFSHLNISDSTEGNICSREILVELEKGDKFVNVDNNYADPQLCATFACDIYKHLRASEAKKRPSTDFMEKIQKEINSSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMNRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNFLKFEMTAPTVKCFLRYIAPLFFPVVFQVPSLQLECLTNYIAELSLMEYSMLGYAPSLVAASAIFLAKFILFPSKKPWNSTLQHYTLYQPSDLCVCVKDLHRLCCNSPNSNLPAIREKYSQHKYKYVAKKYCPPSIPPEFFQN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02355 485 Gene3D - 222 471 - -
Gma04g02355 485 Gene3D - 236 349 - -
Gma04g02355 485 MobiDBLite consensus disorder prediction 1 35 - -
Gma04g02355 485 MobiDBLite consensus disorder prediction 129 148 - -
Gma04g02355 485 MobiDBLite consensus disorder prediction 1 62 - -
Gma04g02355 485 CDD CYCLIN 252 341 IPR013763 -
Gma04g02355 485 PIRSF Cyclin_A_B_D_E 1 481 IPR039361 -
Gma04g02355 485 CDD CYCLIN 373 443 IPR013763 -
Gma04g02355 485 PANTHER CYCLINS 30 484 IPR039361 -
Gma04g02355 485 SMART cyclin_7 363 444 IPR013763 -
Gma04g02355 485 SMART cyclin_7 258 342 IPR013763 -
Gma04g02355 485 Pfam Cyclin, N-terminal domain 222 348 IPR006671 -
Gma04g02355 485 SMART Cyclin_C_2 351 475 IPR004367 -
Gma04g02355 485 SUPERFAMILY Cyclin-like 351 477 IPR036915 -
Gma04g02355 485 ProSitePatterns Cyclins signature. 253 284 IPR006671 -
Gma04g02355 485 MobiDBLite consensus disorder prediction 42 62 - -
Gma04g02355 485 Pfam Cyclin, C-terminal domain 351 471 IPR004367 -
Gma04g02355 485 SUPERFAMILY Cyclin-like 211 348 IPR036915 -
Gma04g02355 485 PANTHER CYCLIN-A1-1 30 484 - -
Gma04g02355 485 MobiDBLite consensus disorder prediction 131 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02355 Gma-Chr4 53970922 53973621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02355 4 485 Core Cell Cycle Gene Families AT1G44110 61.066 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02355 K06627 - gmx:547781 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02355 04 53970922 53973621 Gma04g02355 04 53970922 53973621 ECH
Gma04g02355 04 53970922 53973621 Gma06g01039 06 9731596 9734548 GST
Gma14g01422 14 30219832 30224210 Gma04g02355 04 53970922 53973621 PCT
Gma04g02355 04 53970922 53973621 Gma14g01422 14 30219832 30224210 PCT