Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02338 ATGCCTCCGCGGCGGTGCACGGCGGCGTATTCGGCAGTGGCGCAGATGGGCAGCAACACGAGCGAGAGCGACGCGGAGGAGCTGGTGATGCGGTGCCTCTCGTGCGAGGAGGAGTACGACGTGGACGACTCGGGAACCTGCAGGGAGTGCTACCAGGAGGCCAACGAGGCCGAGGAGGAGCTCCGCCACGAGATCGAGGAGCTCAAATCCAAAGTCTCCTTCCTCACTCTCCCCTCTCCCAATCTTAACGCTTCCACCGCCGATGTCGTCCTCGTtcccgtcgacgactccgacgacgctcccattcccgctcacaagcatcttctgGTTAGTCGCTCTCCTGTTTTCAGAGCAATGCTCAAGAATGATATGACAGAAAGGCGGAGTGGCACCATCAAGATTTCTGACGTATCATATGATACCCTTCATGCTTTTGTTAATTATTTATACACTGCTGAAGCGTCCCTTGATAATGAATTGGCCTGTAACCTGTTGGTTTTAGGAGAAAAGTATCAGGTGAAGCATCTCAAGACATATTGTGAAAAGTATTTGATCGCCAAAATGAATTGGGATAAAGCTATTTCTAACTATGCCTTTGCATATCAATACAATTGCAAACAATTACAAAGTGTGTCCTTGGCAGTGATCTTGGACCACATGGACTCGCTCACTCAAAATGAATGTTATGCGGAGCTGGTGGACACTAATCCTCGTCTTGTTGTGGAAATATATGAAACATACATTGGCAGGCTATTAAATACTGCAGGCGCATTTTAG 777 0.4543 MPPRRCTAAYSAVAQMGSNTSESDAEELVMRCLSCEEEYDVDDSGTCRECYQEANEAEEELRHEIEELKSKVSFLTLPSPNLNASTADVVLVPVDDSDDAPIPAHKHLLVSRSPVFRAMLKNDMTERRSGTIKISDVSYDTLHAFVNYLYTAEASLDNELACNLLVLGEKYQVKHLKTYCEKYLIAKMNWDKAISNYAFAYQYNCKQLQSVSLAVILDHMDSLTQNECYAELVDTNPRLVVEIYETYIGRLLNTAGAF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02338 258 SUPERFAMILY POZ domain 84 185 IPR011333 -
Gma04g02338 258 PANTHER SPECKLE-TYPE POZ PROTEIN 26 255 - -
Gma04g02338 258 Gene3D - 189 251 - -
Gma04g02338 258 PANTHER GH01369P 26 255 - -
Gma04g02338 258 SMART BTB_4 87 188 IPR000210 GO:0005515
Gma04g02338 258 Coils Coil 47 71 - -
Gma04g02338 258 ProSiteProfiles BTB domain profile. 87 158 IPR000210 GO:0005515
Gma04g02338 258 Gene3D Potassium Channel Kv1.1; Chain A 45 188 IPR011333 -
Gma04g02338 258 Pfam BTB/POZ domain 84 186 IPR000210 GO:0005515
Gma04g02338 258 CDD BTB_POZ_ZBTB_KLHL-like 87 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02338 Gma-Chr4 53809381 53812147 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gma04g02338 BTB 2e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02338 K10523 - gmx:100794443 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02338 04 53809381 53812147 Gma04g02338 04 53809381 53812147 ECH
Gma04g02338 04 53809381 53812147 Gma06g01059 06 9914315 9917182 GST