Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02332 ATGATTTTATCACGGGATGATACAAAAGTTGTGCTAGTTGCATGGTTTCTATTAATGATCTCAGCAATGTCGCAAACAATTCGTCCTAGCTGCCAAAATAAATGTGGAAGTGTGAACATTCCATATCCTTTTGGTACAACTGAGAACTGCTGCTTGAACAGAAACTTTTATGTTGCTTGTAACACAAGTCACAACCCTCCCAAACCATTTCTGTGGAATGTGACAAAAAATATTGAGATTTTAGAGGTGTCGTTGAATGGCCATTTGAGGATAAAATCCCCTGTAGCTTATGTTTGCTATGATGAAAAGGGTGTGCTAGTGGATTCCGGAAATTCATTCATGACTTTGCAAGCATTCCACTTCTCATACTCTCAGAACAAGTTCATTGGAATTGGATGTGACACCCTTTCAACCATCAATGCAACAATTGGGAAAAACTACTCAGCTGGAGGGTGTTTTTCACTTTGTAGTAGTGTAGAAAGTTCAGCCAATGGATCCTGGTTTGGCATTGGTTTCTGCCAAACCTCTATCCCAAAAAACATTTTGGCATATCAAGCTCGTGTCCTGAGATCAAATTTGATGCATAGTGATATGAATATTCCTTGTGCCTACTCTCTTTTGGTTGAAGAGGACTCTTTCAAGTTCTCCACGGATGACTTCATCAAACTTCAGAAGACAAAAACAGCTACCACAGTGCTTGATTGGGCTGTTGGAAATCAGACATGTCAAGAAGCTAAGAAGAATTTAACTAGTTATGCCTGCCAAGCAAATAGTGTATGTATTGATTCTGACAATGGACCAGGGTACCTTTGCAGATGCTTAGAAGGTTATGTGGGAAATGCATACCTTCATGGTGGATGCCAAGATATTGATGAGTGCGCCAATCCGAGTCTAAATGACTGTTCAGATATTTGCCTTAACCTACCTGGGAGCTATAATTGCTCTTGTCCCAAGAGCAAGAGTTATGAGGGAGATGGCAGAAAAGGAGGTAGTGGCTGTGTCTCGAATCTACCACATGTGGTTAATCAGATTGTGATAGGCACTGGCATAGGCCTTATGCTGTTGTTAATTGGTAGTGGCTGGCTATTCCATGTGTTCCGTAAAAGAAAAATGGTGAGACTCACAGCAAGATATTTTAAGAGAAATGGTGGCTTAATGTTGCAGCAGCAAATTGCGAACATGGAAGGATCATCTGAGAGAGCCAAAATTTTCACTGCAACTGAGCTAAAGaaagcctccgaaaactttcatgagagcagaatcattggcagaggaggatacggtacggtttataggggaatacttccaaatgacaaagttgttgctatcaagaaaTCAAAACTAGTAGACCACAGCCAAATTGAACAATTCATCAATGAAGTGGTTGTACTGTCCCAAATCAACCACAGAAATGTTGTCAAACTCCTAGGTTGCTGTCTAGAGACAGAAATGCCACTACTGGTTTATGAATTTGTGAACAATGGCACCCTCTTTGACCACATTCACAACAAAAACACCACACTTCCCTGGGTAACACGTCTAAGAATAGCAGCAGAAACGGCTGGTGTGCTTGCATACTTGCATTCTGCTGCCTCCATACCAGTCATCCATAGGGACTTTAAGTCAACTAACATACTGTTGGATGACAAATACACAGCTAAGGTTTCTGACTTTGGAACCTCGAGATTGGTTCCACGTGACAAGTGTCAATTAACAACATTGGTTCAGGGAACTCTTGGCTACCTTGACCCTGAGTACTTTCAGACCAGCCAACTAACTGAGAAAAGCGATGTGTATAGCTTCGGTGTCGTGCTTGCGGAGTTGCTAACTGGAAGAAGGGCACTTTCTTTTGACATGCCAGAGGAAGAGAGAAACTTAGCCTTGTATTTCCTTTCAGCTGTGAAGGATGATTGCTTGTTCCAAATTGTAGAGGATTGTGTGAGTGAGGGAAATAGTGAGCAGGTGAAGGAAGTTGCTAACATTGCTCAATGGTGCTTGAGGCTTAGAGGTGAGGAAAGACCTACCATGAAGGAAGTGGCAATGGAATTGGATAGTCTTAGAATGATGACAACAACAACTACATGGATTAATGCCGCATCAAATTCAACAGAATATGTGATTGGTGAAAGATCAGGTCGAACAGAAACAACAGACTATGCTAATTGTCATTATACTACATGTGCTGGGCATGAGGATGACACCATTTGCAACGATGTGATGTCACCGTTATGGGATGGACCACAAGAACCTAAGAAACAAAGTCATGGCTGTGCACTCGAAGCAGCTGCAGCTGCTACTTGTTGTGCTTCTTATTGCAGAAACTAA 2325 0.3991 MILSRDDTKVVLVAWFLLMISAMSQTIRPSCQNKCGSVNIPYPFGTTENCCLNRNFYVACNTSHNPPKPFLWNVTKNIEILEVSLNGHLRIKSPVAYVCYDEKGVLVDSGNSFMTLQAFHFSYSQNKFIGIGCDTLSTINATIGKNYSAGGCFSLCSSVESSANGSWFGIGFCQTSIPKNILAYQARVLRSNLMHSDMNIPCAYSLLVEEDSFKFSTDDFIKLQKTKTATTVLDWAVGNQTCQEAKKNLTSYACQANSVCIDSDNGPGYLCRCLEGYVGNAYLHGGCQDIDECANPSLNDCSDICLNLPGSYNCSCPKSKSYEGDGRKGGSGCVSNLPHVVNQIVIGTGIGLMLLLIGSGWLFHVFRKRKMVRLTARYFKRNGGLMLQQQIANMEGSSERAKIFTATELKKASENFHESRIIGRGGYGTVYRGILPNDKVVAIKKSKLVDHSQIEQFINEVVVLSQINHRNVVKLLGCCLETEMPLLVYEFVNNGTLFDHIHNKNTTLPWVTRLRIAAETAGVLAYLHSAASIPVIHRDFKSTNILLDDKYTAKVSDFGTSRLVPRDKCQLTTLVQGTLGYLDPEYFQTSQLTEKSDVYSFGVVLAELLTGRRALSFDMPEEERNLALYFLSAVKDDCLFQIVEDCVSEGNSEQVKEVANIAQWCLRLRGEERPTMKEVAMELDSLRMMTTTTTWINAASNSTEYVIGERSGRTETTDYANCHYTTCAGHEDDTICNDVMSPLWDGPQEPKKQSHGCALEAAAAATCCASYCRN 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02332 774 CDD STKc_IRAK 422 686 - -
Gma04g02332 774 ProSitePatterns Protein kinases ATP-binding region signature. 422 445 IPR017441 GO:0005524
Gma04g02332 774 ProSiteProfiles Protein kinase domain profile. 416 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g02332 774 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Gma04g02332 774 Gene3D Laminin 292 329 - -
Gma04g02332 774 SUPERFAMILY Growth factor receptor domain 237 321 IPR009030 -
Gma04g02332 774 SUPERFAMILY Protein kinase-like (PK-like) 402 701 IPR011009 -
Gma04g02332 774 Gene3D Transferase(Phosphotransferase) domain 1 492 705 - -
Gma04g02332 774 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 707 IPR045274 GO:0007166
Gma04g02332 774 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 24 707 - -
Gma04g02332 774 Gene3D Phosphorylase Kinase; domain 1 381 491 - -
Gma04g02332 774 Pfam Wall-associated receptor kinase galacturonan-binding 31 89 IPR025287 GO:0030247
Gma04g02332 774 CDD EGF_CA 289 317 - -
Gma04g02332 774 Gene3D Laminin 239 291 - -
Gma04g02332 774 ProSitePatterns Calcium-binding EGF-like domain signature. 289 314 IPR018097 GO:0005509
Gma04g02332 774 SMART egf_5 241 288 IPR000742 -
Gma04g02332 774 SMART egf_5 292 334 IPR000742 -
Gma04g02332 774 Pfam Protein kinase domain 416 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g02332 774 SMART egfca_6 289 334 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02332 Gma-Chr4 53745708 53749453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02332 10 708 Receptor kinase-like Gene Family AT1G21230 44.228 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Gma04g02332 Pkinase 6.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02332 - - gmx:113001466 1511.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02332 04 53745708 53749453 Gma04g02332 04 53745708 53749453 ECH
Gma04g02332 04 53745708 53749453 Gma06g01068 06 9995646 9998598 GST
Gma14g01464 14 31554668 31558252 Gma04g02332 04 53745708 53749453 PCT
Gma04g02332 04 53745708 53749453 Gma14g01466 14 31620478 31624117 PCT