Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02320 ATGGATAGCCCTCCAGCTTCTGCATCTTACGTAGTGGTTGCATGTGATGCCACTAGGAATCGCACTGAACACGAGATCAAACTCGTTGTTGATCATGTTCAGGAAAGGCATGTCTTTCTCCCTTCTGGTGACAAGTTGCTTATATATAAATTGTTCTATCAAATGTTGCATGACTATCTTGTTCCTCCTTACCAGACATTAGCATGTCCCGAGTCTTTTGCTGGAACCAACTTTCGTGCAATGGAGGATGAAGTCAAGAAGAAAGTTGATGCATATGCAACTAAGCTTTTGCCAAGTTATGAAAATTTTGAAAGTGAAGGGTGGATATATGAAACTTTGTTTCAATTTTGTTTTCCAAATAATAAAATTTCATTTTTCTTTGTTTCCTATTTATTTTCTTCTTATGGTTTTCAACTTTATTGGGTAAATTTGAACAGACATCTTCGGCGAGACATGAGGTACCACCTTAATAAGATGCCATGCAAGATTGCATTGGTTAAATATGACTTGTCTCTGGATATCTGGAGATCTCATTATGTACATGAGACAAAGATCACAGAAACAAAATGCGTATATTCTTTGCCAAAGTTTGTGTCGCTAGCAGATTGTCATAGTGTTGAAGACATTGAGGATTCTATTATCTCTTGCAAAAGTTATCCCCATTCTATATTTTCTTGTGATAGCTCTAGTACGATTAGGAGCTACACAAAGCAGTCATCATATGGTAACAGGTCACGGGAGAACAGTTCCTTATCAGATTTTGGATCTTCTTCTAAGCAAGATAGATCAGGCATAAGCATCAAAGGAGAATGTAGGCTAATTACTTCTCAGATTGACCAAAAACAAAATCAAAGTGGCTTTCTGCCAAAACATTCAGATGCTCCGCTTCTTTGTACTGGCTGTGGTACAAGATTGTCTATCAAGGAGTCAATGAGGTTCAGCTATTCTGACATTCAAAGTGCAACAAATGATTTTTCAAAGGATAAATTATTAGGTGAAGGTGGATATGGTCACGTATATAACGGTGTTCTTAAAGATGGACAGCAAATTGCCGCAAAGGTAAGGAAAGAAGAAAGTTCACACGGGCCGGGTTTTCTGAATTTCATTCTGAGGTGTGTCTTAAGTTTTTCTCGACACAAGAACATAGTGATGCTGTTGGGTTACTGTTGCAAAGAAAAGAAAAACATCCTGATTTATGAATATATTTGCAACAAGTCTCTCCATTGGCATTTATTTGAAAATAATGAAGCTGTTCTTGAGTGGCACCAAAGGTATGCCATCGCCATTGGGACTGCAAAGGAATTGCGTTTTCTACATGAGGAATGTCGTGGTGGTCCTATTATTCATCGGGACATGCGACCAAGCAATAGACTTCTCACCCATGATTTTGTTCCCATGCTAGGTGACTTTGGCCTTGCCAAATGGAAGACTGGTGATGATACTCTACAAACAAGGATAATGGGCACATTAGGATCATATAATTTTGGAATTCCGAACTTAAAATATGCTGAAGACGGAATTGTTTCTGTGGGAACAGATGTGTATTCTTATGGCATTATTCTATTGATATCAGGGCGCCAGGTTGGCAATTCCAAAAATCCAGAACAACAACAATCTCTCCGACTATGGGCTGAGCCTATGATAGAGAAGTTGGCTTTACATGAACTGATTGACACTCGTCTAGGGGAATCATATGACACGTATGAACTCTACCTCATGGCTAAAGACGCATACTTCTGTGTGCAAAGGAAACCTGAGATGCGTCCTTCAATGGGAGAGGTACTTTGGTTCAATTGTGCGAATTTCTTTTCGGCAAAGCATCCTCTGCCGGGTAGCACCCAGCCTCTAGCTTGGAATGGCAGAATTTTTTGGATTTTGGAGAGTGTTGGCTACTTGGCTTAG 1902 0.3954 MDSPPASASYVVVACDATRNRTEHEIKLVVDHVQERHVFLPSGDKLLIYKLFYQMLHDYLVPPYQTLACPESFAGTNFRAMEDEVKKKVDAYATKLLPSYENFESEGWIYETLFQFCFPNNKISFFFVSYLFSSYGFQLYWVNLNRHLRRDMRYHLNKMPCKIALVKYDLSLDIWRSHYVHETKITETKCVYSLPKFVSLADCHSVEDIEDSIISCKSYPHSIFSCDSSSTIRSYTKQSSYGNRSRENSSLSDFGSSSKQDRSGISIKGECRLITSQIDQKQNQSGFLPKHSDAPLLCTGCGTRLSIKESMRFSYSDIQSATNDFSKDKLLGEGGYGHVYNGVLKDGQQIAAKVRKEESSHGPGFLNFILRCVLSFSRHKNIVMLLGYCCKEKKNILIYEYICNKSLHWHLFENNEAVLEWHQRYAIAIGTAKELRFLHEECRGGPIIHRDMRPSNRLLTHDFVPMLGDFGLAKWKTGDDTLQTRIMGTLGSYNFGIPNLKYAEDGIVSVGTDVYSYGIILLISGRQVGNSKNPEQQQSLRLWAEPMIEKLALHELIDTRLGESYDTYELYLMAKDAYFCVQRKPEMRPSMGEVLWFNCANFFSAKHPLPGSTQPLAWNGRIFWILESVGYLA 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02320 633 Pfam Protein tyrosine and serine/threonine kinase 327 522 IPR001245 GO:0004672|GO:0006468
Gma04g02320 633 PANTHER OS01G0253100 PROTEIN 9 596 IPR045271 GO:0004714|GO:0006468
Gma04g02320 633 Gene3D Transferase(Phosphotransferase) domain 1 403 601 - -
Gma04g02320 633 PANTHER RECEPTOR-LIKE KINASE 9 596 - -
Gma04g02320 633 SUPERFAMILY Protein kinase-like (PK-like) 309 606 IPR011009 -
Gma04g02320 633 Gene3D Phosphorylase Kinase; domain 1 300 401 - -
Gma04g02320 633 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Gma04g02320 633 MobiDBLite consensus disorder prediction 237 263 - -
Gma04g02320 633 ProSiteProfiles Protein kinase domain profile. 325 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02320 Gma-Chr4 53659887 53666443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02320 313 595 Trihelix Transcription Factor Family AT5G38560 39.041 4.55e-57 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gma04g02320 PK_Tyr_Ser-Thr 3.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02320 - - gmx:100800663 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02320 04 53659887 53666443 Gma04g02320 04 53659887 53666443 ECH
Gma04g02320 04 53659887 53666443 Gma06g01076 06 10076429 10082128 GST