Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02315 ATGTCTCAGGGAAGAGGCAGTGCATCTTTACCTATTGTGGTCACTGTGGTTTCACTACTGTGCCTTTTGGTTCTTTTGGAACGTGCTGATGCAGCAACTTACACCGTTGGAGGACCTGGGGGATGGACCTTCAACACTAATGCTTGGCCCAAAGGAAAAAGATTCAGAGCTGGTGATATCCTAATCTTCAATTATGATTCAACGACCCACAATGTGGTTGCTGTGGACAGAAGTGGATACAACAGCTGCAAAACGCCAGGGGGTGCTAAAGTGTTCAGTTCAGGGAAGGACCAAATCAAACTAGCAAGAGGGCAGAACTACTTCATATGCAACTACCCTGGTCACTGCGAATCTGGGATGAAAGTTGCCATTAATGCAGTGTGA 384 0.4661 MSQGRGSASLPIVVTVVSLLCLLVLLERADAATYTVGGPGGWTFNTNAWPKGKRFRAGDILIFNYDSTTHNVVAVDRSGYNSCKTPGGAKVFSSGKDQIKLARGQNYFICNYPGHCESGMKVAINAV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02315 127 CDD Plantacyanin 32 126 IPR041844 -
Gma04g02315 127 PANTHER BLUE COPPER PROTEIN 5 125 IPR039391 GO:0009055
Gma04g02315 127 SUPERFAMILY Cupredoxins 32 126 IPR008972 -
Gma04g02315 127 ProSitePatterns Type-1 copper (blue) proteins signature. 104 120 IPR028871 -
Gma04g02315 127 Gene3D - 32 127 IPR008972 -
Gma04g02315 127 ProSiteProfiles Phytocyanin domain profile. 32 127 IPR003245 GO:0009055
Gma04g02315 127 PANTHER BASIC BLUE-LIKE PROTEIN 5 125 - -
Gma04g02315 127 Pfam Plastocyanin-like domain 42 120 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02315 Gma-Chr4 53593800 53595158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02315 1 127 Phytocyanin Superfamily AT1G17800 40.580 4.22e-27 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02315 - - gmx:100788635 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02315 04 53593800 53595158 Gma04g02315 04 53593800 53595158 ECH
Gma04g02315 04 53593800 53595158 Gma06g01082 06 10147107 10148444 GST