Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02313 ATGTCATTAGTTAGGTCTGCTGATCTAGCTCCAACATCATATGAAAATGCTAAGCTCTTCTCACTGAAGGGAACTGATGTTCGACCGGGGCTGTCCTCACAAATTTTTGGTCCTGATAAGCATAGGAGCACGTACATGACGGATACTTACCCCAGCGAGAGTTATGAGAAGTACTTCCATGACTCACAAACAGAAGAAATAATAGAACCATCTAGTTCCAGCATCTCTGGAAGTTCAATTCACCCTGATGTAGCCTCTTCTTACCAGATCAGAGCCATTTCAGGAGCTTCTATGGTTGCCAACAACCCATTTGATTCTTCTTTCATGTCTACAAGGCATCGTGATGCTTATCAGTCAAACTCTGGATCAGATTTGATGGAGAATGGAAGCCTGGATTCACGCAACGATGATGGTCTAATGAGATTAAAACTACAAGCATTGGAAAGGGCATTGCTTGATGATAGTGATGCTGAAGAAGAGGAGGAAGAAGAGGAAGACATATTTGAGGCTGCTCAAAGCATGGAAATTGATCCTGACATAGCTGAGTGGGCTGATTCGATGCAGAATATGCTGCTCCATGATTCACCAAAGGAGACCTCTTCTTCAGATTCCAATATTAGCAGCATCAGCAGCACCAAAGAAATATCTCAAACTTCTCAGAACCCCAGGAAGTTGCTTTATGAATGTGCTATTGCACTTTCAGAAGGAAATGAAGTGGAAGGATCATCTATGATAAACAATCTCCGGCAGATGGTCTCAATTCAGGGAGAGCCTTCTCAAAGAATTGCAGCCTATATGGTTGAGGGACTTGCAGCTCGCCTGGCCGAATCCGGCAAAAGTATTTACAAAGCTCTGAGATGCAAGGAACCTCCAACTTCAGATCGTCTAGCAGCTATGCAGATACTGTTTGAGGTTTGCCCATGTTTCAAATTTGGATTCATTGCTGCTAATAATACAATTACAGAAGCAGTGAAAGATGACATGAAGATTCATATAATAGATTTTGACATCAATCAAGGAAGTCAGTACATAAATCTAATCCAAACACTTGCTTCAAGGTCAAGCAAGCCACCCCATGTTAGGTTGACTGGAGTTGATGATCCTGAGTCTGTGCAGCGATCTGTTGGAGGCCTACAGAACATAGGACAAAGACTAGAAAAACTTGCAGAGGCACTTGGTTTGCCATTCGAGTTTCGAGCAGTGGCATCAAGGACTTCCATTGTCACCCCATCAATGCTCGACTGTAGTCCTGATGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCCCGACGAGAGTGTTTCAACAGCAAACGAACGGGACCAACTTCTTCGCTTGGTGAAGAGCTTGAATCCAAAGCTTGTGACAGTGGTGGAGCAAGATGTGAACACAAACACCACCCCCTTCTTACCTAGATTTGTTGAGGCCTACAATTATTACTCTGCTGTGTTTGAGTCACTTGATGCTACTCTTCCTAGAGAAAGCCAAGACAGGATGAATGTTGAAAGGCAATGCTTAGCAAGGGACATTGTCAATGTCGTTGCGTGTGAGGGCGAGGATAGGATAGAACGGTATGAAGTTGCAGGAAAATGGAGAGCAAGGATGACAATGGCTGGCTTCACTTCATCCCCCATGAGCACAAATGTGACTGATGAAATCCGACAACTCATTAAGGTGGTGTATTGCGACAGGTACAAGATTAAGGAGGAAATGGGTGCACTTCACTTTGGTTGGGAAGACAAAAGCTTGATCGTTGCTTCAGCATGGAAGTTACCAAGATAA 1791 0.4383 MSLVRSADLAPTSYENAKLFSLKGTDVRPGLSSQIFGPDKHRSTYMTDTYPSESYEKYFHDSQTEEIIEPSSSSISGSSIHPDVASSYQIRAISGASMVANNPFDSSFMSTRHRDAYQSNSGSDLMENGSLDSRNDDGLMRLKLQALERALLDDSDAEEEEEEEEDIFEAAQSMEIDPDIAEWADSMQNMLLHDSPKETSSSDSNISSISSTKEISQTSQNPRKLLYECAIALSEGNEVEGSSMINNLRQMVSIQGEPSQRIAAYMVEGLAARLAESGKSIYKALRCKEPPTSDRLAAMQILFEVCPCFKFGFIAANNTITEAVKDDMKIHIIDFDINQGSQYINLIQTLASRSSKPPHVRLTGVDDPESVQRSVGGLQNIGQRLEKLAEALGLPFEFRAVASRTSIVTPSMLDCSPDEALVVNFAFQLHHMPDESVSTANERDQLLRLVKSLNPKLVTVVEQDVNTNTTPFLPRFVEAYNYYSAVFESLDATLPRESQDRMNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARMTMAGFTSSPMSTNVTDEIRQLIKVVYCDRYKIKEEMGALHFGWEDKSLIVASAWKLPR 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02313 596 ProSiteProfiles GRAS family profile. 213 593 IPR005202 -
Gma04g02313 596 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 594 IPR030011 GO:0003700|GO:0005634
Gma04g02313 596 MobiDBLite consensus disorder prediction 193 217 - -
Gma04g02313 596 Pfam GRAS domain family 223 593 IPR005202 -
Gma04g02313 596 Coils Coil 144 164 - -
Gma04g02313 596 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 594 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02313 Gma-Chr4 53556918 53560609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02313 1 593 GRAS Transcription Factor Family AT1G21450 60.972 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma04g02313 GRAS 2.6e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02313 - - gmx:100788103 1097.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02313 04 53556918 53560609 Gma04g02313 04 53556918 53560609 ECH
Gma04g02313 04 53556918 53560609 Gma06g01084 06 10174968 10178859 GST
Gma14g01522 14 36380898 36384813 Gma04g02313 04 53556918 53560609 PCT
Gma04g02313 04 53556918 53560609 Gma14g01522 14 36380898 36384813 PCT