Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02259 ATGTATGCAGAGACTGGTCTTCTCTTCCCATATTTGAACAACATCTCTCACGGCCTTCATCAGCTCGAGGAGTACTGCAAAACCCAGAAGTCCAATGCTTCAATGGATGACCTTGTTCAGTCTTCTGTCATGTCAGAGTATGATTTGGCAGCAGAGGGAGATCTGTTCAAAGCTCCTGAACCTATTATTGAAGAGCCAATCATGGATATGGATCCCATGACAGCCACCATCTCCATGATATCTTGTGGGGAAGATGTCTCCTCACAGGGACTAAAATCCACTGATATTGATATTCTTCAAAATGATCAGTTTCTGCATGAGGTGTTCTATGAATGTGAAAAGGATCTCTTAGAAAAGGCAGCAATAGAGCCACCATTCTCTGAGATTCTGGAAATCAAGGTTCCTCTTCTGAACATTGATGAGAACACAATTCAAGAAAACAAGCTGCTTCCTGACATGCAATTAGCAAAGAGTGTCAGCTCAGGAAGTTTGAGCTCAATGGACTGGATGCGTGGAGCTGCAATGAAGCCTTCTTTCATTGATATCCCTGCAATAGATTTCAATGCAGATTATGGCATGCGGAGATCATTTAGCGAAGGAGATATAAAGACTCTTGGTAATGGTAACATGAACATCGTCCAATCACCCCTTGAGAGGCCCTTACTTATCAGCAACTGCACCAGTGAGGAACGCTTTCAAAAGCTCTCAAGATACAGGAATAAGAGGACAAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGTCAGCCAAGAATCCGTGGGAGATTTGCAAGGACTGAAGAGTCTGATGTCAAGAGGGAATGA 846 0.4338 MYAETGLLFPYLNNISHGLHQLEEYCKTQKSNASMDDLVQSSVMSEYDLAAEGDLFKAPEPIIEEPIMDMDPMTATISMISCGEDVSSQGLKSTDIDILQNDQFLHEVFYECEKDLLEKAAIEPPFSEILEIKVPLLNIDENTIQENKLLPDMQLAKSVSSGSLSSMDWMRGAAMKPSFIDIPAIDFNADYGMRRSFSEGDIKTLGNGNMNIVQSPLERPLLISNCTSEERFQKLSRYRNKRTKRNFGRKIKYACRKALADSQPRIRGRFARTEESDVKRE 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02259 281 ProSiteProfiles CCT domain profile. 231 273 IPR010402 GO:0005515
Gma04g02259 281 Pfam CCT motif 231 273 IPR010402 GO:0005515
Gma04g02259 281 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 27 279 - -
Gma04g02259 281 PANTHER CCT MOTIF FAMILY PROTEIN 27 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02259 Gma-Chr4 53030000 53035207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02259 206 277 C2C2-CO-like Transcription Factor Family AT5G57660 39.189 2.36e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma04g02259 CCT 3.3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02259 - - gmx:100814332 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02259 04 53030000 53035207 Gma06g01148 06 10802343 10807429 GST