Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02249 ATGGGGAAGAAAGGAGGGAGCTGGTTCTCGTCGGTGAAGAAAGTTTTCAAGTCCTCTTCTTCTAAGGACTCGCCGCTGCCGGAGAAGAAGAAAGAGAACAACAAGGAAGAACAGTGGCAGCATGTGGCGCCAGAGGAGGTTTCTGTGGAGCATTTTCCTGCAGAGAGTTCTCCAGATCTTACCAATGAAGGGAGTGTCACGTCGTCAACACCAGTGACTGAAGATACAAACCCTGCCGTTGCCTTTGCAGCAGCAACTGCCGCCGCCGCCGAAGCGGCCGTGGCGGCAGCTCAAGCAGCCGCTAGAGTTGTGAGGTTGGCGGGTTATGGACGCCAGTCCAAAGAAGAAAGAGCTGCAATACTCATTCAATCATACTACAGAGGCTACCTTGCTCGACGTGCATTGCGTGCTTTGAAGGGATTGGTGAGGCTGCAAGCGCTGGTGAGGGGACATAATGTGCGAAAGCAAGCGCAAATGACAATGAGATGCATGCATGCATTGGTCCGAGTGCAGACAAGAGTAAGAGCTCGCAGACTGGAGTTGACTGAGGAGAAGCTTCAGAGAAGAGTTTATGAGGAGAAGGTCCAAAGAGAAGTAGATGAACCTAAACAGTTTTTGAGCCCCATCAAAATGTTAGATATGGATGGTTGGGACAGTAGGCGCCAAACTAGCCAGCAAATTAAGGATAATGATTTGAGGAAACATGAAGCTGTAATGAAAAGGGAGAGAGCTCTTGCTTACGCTTTCAACTGCCAGCAGCAGCTGAAGCAACACATGCACATAGACCCAAATGGTGATGATATAGGAAGCTATAGCACTGAGCGTGAAAGAGCCCAATTGGATTGGAACTGGTTGGAACGTTGGATGTCATCACAATCACCCAACTTAAGACCACGTGAGACCCTTTATAGGACTCTTGCTACTGCTACTTCCACCACTGATGACATGTCTGAAGAAAAGACAGTTGAAATGGACATGGGTGCAACTCTGGACTCAACTCATGCTAATATGGGCTTCATTAATGGAGAATCTTTTGACACAAGCCCAATTTCTAATAGGTACCACCAGCGCCACCACAGTGCTGGTGTCCCTAGCTACATGGCCCCAACCCAGTCTGCAAAGGCCAAGGTTCGAAGTCAAGGCCCGTTTAAGCAACGTGGTTCACCTGGGCCTCACTGGAACTCATCCACAAGGAGAGGTTCTTCTGTTGGTTTGGGCTGTGACTCATCTAGCTCTGGTGGGCCCACTGCAGCCCATGTCTTCCCAAGAAGCCCAAACCCAAAAATTAACGAGATTCGCCTCCAATCTAGACGGATTTCAGGTGGCAGCCCAGATAATGTTCACATTGAGGATTGGGCCCTTCCCCTTGGAGCCACCAACGGTTGGGCTTGA 1392 0.4978 MGKKGGSWFSSVKKVFKSSSSKDSPLPEKKKENNKEEQWQHVAPEEVSVEHFPAESSPDLTNEGSVTSSTPVTEDTNPAVAFAAATAAAAEAAVAAAQAAARVVRLAGYGRQSKEERAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMHALVRVQTRVRARRLELTEEKLQRRVYEEKVQREVDEPKQFLSPIKMLDMDGWDSRRQTSQQIKDNDLRKHEAVMKRERALAYAFNCQQQLKQHMHIDPNGDDIGSYSTERERAQLDWNWLERWMSSQSPNLRPRETLYRTLATATSTTDDMSEEKTVEMDMGATLDSTHANMGFINGESFDTSPISNRYHQRHHSAGVPSYMAPTQSAKAKVRSQGPFKQRGSPGPHWNSSTRRGSSVGLGCDSSSSGGPTAAHVFPRSPNPKINEIRLQSRRISGGSPDNVHIEDWALPLGATNGWA 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02249 463 MobiDBLite consensus disorder prediction 1 74 - -
Gma04g02249 463 MobiDBLite consensus disorder prediction 23 44 - -
Gma04g02249 463 Pfam Protein of unknown function (DUF4005) 348 401 IPR025064 -
Gma04g02249 463 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Gma04g02249 463 Pfam IQ calmodulin-binding motif 142 157 IPR000048 GO:0005515
Gma04g02249 463 Pfam IQ calmodulin-binding motif 116 136 IPR000048 GO:0005515
Gma04g02249 463 Gene3D - 113 164 - -
Gma04g02249 463 SMART iq_5 114 136 IPR000048 GO:0005515
Gma04g02249 463 SMART iq_5 137 158 IPR000048 GO:0005515
Gma04g02249 463 MobiDBLite consensus disorder prediction 389 417 - -
Gma04g02249 463 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Gma04g02249 463 PANTHER IQ-DOMAIN 21 1 435 - -
Gma04g02249 463 MobiDBLite consensus disorder prediction 58 74 - -
Gma04g02249 463 MobiDBLite consensus disorder prediction 378 428 - -
Gma04g02249 463 PANTHER IQ-DOMAIN 5-RELATED 1 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02249 Gma-Chr4 52897036 52901709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02249 1 433 IQD Protein Family AT3G49260 49.675 1.36e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02249 - - gmx:100808965 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02249 04 52897036 52901709 Gma06g01160 06 10919656 10924598 GST