Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02222 ATGGGAGGTTCATCGGAAACGAAGCTTATGCAAGACCTGTTGTTGTACGCGGCGAGCGCGGCGCTAAGTTGCTTGGTGTTGTTCGCCGGACTGAGACACCTGGACCCTAATCGCGAATCGTCGAAGAAGGCTCTCGAGCATAAGAAAGAGATTGCAAAGCGTCTCGGTCGCCCCCTCATTCAGACTAACCCTTACGAGGATGTAATAGCCTGTGACATTATAAATCCTGATCACATTGATGTGGAGTTCAACTCTATCGGGGGACTGGAGACAATCAAGCAAGCTTTGTTTGAGCTTGTTATTCTGCCTCTAAAAAGACCAGACTTGTTTTCACACGGTAAGCTTCTTGGACCACAAAAGGGGGTCCTGTTGTATGGACCGCCCGGCACTGGAAAAACCATGCTTGCCAAAGCTATTGCCAAGGAGTCAGGAGCAGTTTTTATTAACGTGAGAATATCGAACTTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTGTTGCTGCTGTATTTAGCTTGGCTTATAAGCTTCAGCCTGCCATCATATTCATTGATGAAGTAGACAGTTTTTTGGGTCAGCGTCGTACAACAGATCACGAGGCTTTGTTAAACATGAAAACTGAATTCATGGCTCTGTGGGATGGATTTACAACAGATCAGAATGCTCAAGTTATGGTCCTTGCAGCAACTAATCGTCCTTCAGAACTTGATGAAGCAATTCTTCGGCGTCTTCCTCAAGCCTTTGAAATTGGAGTTCCAGACCAAAGGGAGAGGACTGAAATATTGAAAGTTGTCTTAAAGGGTGAGAGGGTTGAAGACAACATAGACTTTGGTCATATAGCTGGCTTGTGTGAGGGTTACACTGGTTCAGATCTATTTGATCTATGCAAGAAAGCTGCCTATTTTCCTATTAGAGAACTTCTGGATGAAGAAAAGAAAGGAAAACGATCTCCTGCACCTAGACCTTTGTCCCAGTTAGATTTGGAGAAGGCCCTTGCTACTTCACAGAAGACAAACGTTGCTGCTAGTGAATACAGTGGATTCAGCCTTCAGTCACCTTCAAGATGGACAGTGCCTGGTGAGTCAGGTGATTCTCAGTTTCAAGCTGCAATCCATGAAGTCTCTAAGCTTGTGGTTTCTCACATGATTAACCTCCAATCGGATTCTCAGGATCCTTAA 1179 0.4512 MGGSSETKLMQDLLLYAASAALSCLVLFAGLRHLDPNRESSKKALEHKKEIAKRLGRPLIQTNPYEDVIACDIINPDHIDVEFNSIGGLETIKQALFELVILPLKRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTTDHEALLNMKTEFMALWDGFTTDQNAQVMVLAATNRPSELDEAILRRLPQAFEIGVPDQRERTEILKVVLKGERVEDNIDFGHIAGLCEGYTGSDLFDLCKKAAYFPIRELLDEEKKGKRSPAPRPLSQLDLEKALATSQKTNVAASEYSGFSLQSPSRWTVPGESGDSQFQAAIHEVSKLVVSHMINLQSDSQDP 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02222 392 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 3 345 - -
Gma04g02222 392 CDD AAA 116 251 - -
Gma04g02222 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 310 IPR027417 -
Gma04g02222 392 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Gma04g02222 392 Gene3D - 80 338 IPR027417 -
Gma04g02222 392 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 3 345 - -
Gma04g02222 392 SMART AAA_5 118 254 IPR003593 -
Gma04g02222 392 Gene3D - 253 333 - -
Gma04g02222 392 Pfam AAA+ lid domain 274 310 IPR041569 -
Gma04g02222 392 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02222 Gma-Chr4 52601997 52607408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02222 39 318 Calmodulin-binding Proteins AT3G56690 32.394 5.75e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02222 K22530 - gmx:100796908 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02222 04 52601997 52607408 Gma06g01193 06 11237984 11241640 GST