Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02207 ATGGGTGAATTATTTGGCGTTGGGAAAAGAAGGGACATCATCAGCAACAACAACAGTGCTAGTAGTAGCGTTCTTGGGTTGGATGTGAAGGTGCAGAGCCCTGAAGTATTATTCCATAATAGGATGACCATGATGGGGCATCATAATCATCACCTCCATCCATTGTCATCCCCCTTTGATAATAATAACGATATTTCCTGTGCTGCTGGTGATGGCGATGGTGATGGTCCCACGACTTACATGTCTCTCACTAATCATATAAACCTTGTTAGTGGTGCTTCTGTTCTTGGTCCTGCTATTGATGGTGGCTGTGGTGCTGCTCCTGCTGCACCTGTAAGAACTTTGCAGCCTTTTCAAATTTCTTCTTATACTTCTCCCACCACCACTACCACAGCCTTCGAACCCTTTTCAGGTGTGATGGCGGCTTCATTGGGGTTTCCCTTCACAAGTGcacaatggagggagcttgaaaggcaggctatgatatacaagtacatgatggcttcagttcctgttccacctgatctcctcattcctaCTTCACTCACATCCTCTTCTCGCTCTTCCTGCAtggatggtggtttcaatctgaggttggcaaatagcactgaccctgagccaggtaggtgcagaagaacagatggaaaaaaatggagatgttcaagagacgtggctcctaaccacaagtactgcgagcgccatatgcatagaggccgtccccgttcaagaaagcctgtggaagttaacaccaacaccactcccactagcatcaacaacaacaATAACAACCACCAAATCAAAAGGGCTCGCCATGAGTGTAATAATCCCTTTGCTACACCTGATGTTGCTGTGGCTATTTCCAATCCCACTTCCAGAAAAGGTGAATCTTCATCCCATTTTCTTGGGTCTACTACCACTCAGCCATACCTTAAATCTCCCCTCTGTCTTGCTAACTTCGGTCTCAAAGCTGCGAGTTTTGACTCCGTGGCTTCTGTTTCTGCAAATAAGGAACCCAGGGGTTTGGAGTGGATGCTGAATGGAGATCCTATTTCCCTGGATGCTTCTAACTCCCAATGGCAGTCTCTGATGCATAATAAAGTTGGAATGAGCAGTGTTAGTTCCTGTAATACCACCGAGTCTCAGTATCTGAATTCATTTGCACTATATAGCTCTGGACTGGAACAACAGAACAGACGCCATCCTTTGTTCCTGAATCCTCTTCTTGTTCCCATGAAAAATCTCCAACCAGAGAAACCAAGGGGTTTCATTGATGCTTGGTCTAATGCAGAAACAGCTCAAAGCAATGCCAACACCAACAACAAGAACTCTGCTGCATCAATTGGTAAATTATCCCTCTCTTCTCTTGATCTATCAATGGGGGGTGGTGCTGTGAGTGAAGATGTTGATAATGTTAACATGGGTTTGGGACTAATGGAGACTTATGGAAAAACACACACTGATACTAAAATCTCTCTCTCAAATTGGCACAACCCGGCACCTTGGGTGGCTTCAAGTTCAACACTTGGGGGTCCTCTAGCTGAAGTTCTAAGGTCAAGCACAGTCACTGCCACGACCAATGAAGCAACCTCCAACGCAACCTCATCACCAGCCACCACTACACATGCTGAATCTAACAGCCCTCTGGGAACAATGGTGTCATCTCCATCCGGGGTGTTGCAGAAAACCCTTATTTCATTGTCTGATAGCAGTAACAATAGCAGCCCTACGGTTGCATCATCAAGGGCCAATTCTGAGATGGCCTTCCTCAGGTTTCAATAA 1779 0.3794 MGELFGVGKRRDIISNNNSASSSVLGLDVKVQSPEVLFHNRMTMMGHHNHHLHPLSSPFDNNNDISCAAGDGDGDGPTTYMSLTNHINLVSGASVLGPAIDGGCGAAPAAPVRTLQPFQISSYTSPTTTTTAFEPFSGVMAASLGFPFTSAQWRELERQAMIYKYMMASVPVPPDLLIPTSLTSSSRSSCMDGGFNLRLANSTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVNTNTTPTSINNNNNNHQIKRARHECNNPFATPDVAVAISNPTSRKGESSSHFLGSTTTQPYLKSPLCLANFGLKAASFDSVASVSANKEPRGLEWMLNGDPISLDASNSQWQSLMHNKVGMSSVSSCNTTESQYLNSFALYSSGLEQQNRRHPLFLNPLLVPMKNLQPEKPRGFIDAWSNAETAQSNANTNNKNSAASIGKLSLSSLDLSMGGGAVSEDVDNVNMGLGLMETYGKTHTDTKISLSNWHNPAPWVASSSTLGGPLAEVLRSSTVTATTNEATSNATSSPATTTHAESNSPLGTMVSSPSGVLQKTLISLSDSSNNSSPTVASSRANSEMAFLRFQ 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02207 592 Pfam WRC 205 247 IPR014977 -
Gma04g02207 592 PANTHER GROWTH-REGULATING FACTOR 7 112 583 - -
Gma04g02207 592 MobiDBLite consensus disorder prediction 245 262 - -
Gma04g02207 592 SMART QLQ_2 146 182 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma04g02207 592 Pfam QLQ 147 179 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma04g02207 592 ProSiteProfiles WRC domain profile. 204 248 IPR014977 -
Gma04g02207 592 ProSiteProfiles QLQ domain profile. 147 182 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma04g02207 592 MobiDBLite consensus disorder prediction 236 262 - -
Gma04g02207 592 PANTHER - 112 583 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gma04g02207 592 MobiDBLite consensus disorder prediction 523 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02207 Gma-Chr4 52464526 52467207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02207 415 570 GRF Transcription Factor Family AT5G53660 33.133 5.45e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gma04g02207 WRC 6.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02207 - - gmx:100803096 1040.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02207 04 52464526 52467207 Gma06g01208 06 11372813 11375421 GST