Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02206 ATGATCTACAATATTCGACATATTTTGCTCCTATTTTTCTTACTTCATAATTTTCATGACATACTATGCAACAATGACACAGACAAAGATGTCCTTCTTTCATTCAAATCCCAAGTGAGTGACCCCAAAAATGTTCTGTCTGGGTGGTCTTCAGATTCCAATCACTGCACCTGGTATGGTGTCACATGCTCCAAAGTTGGCAAGAGGGTCCAATCTCTCACTCTACCAGGACTTGCCCTCTCTGGCAAACTTCCCGCTCGTCTTTCCAACCTCACTTACCTACACTCCCTTGACCTTTCCAACAACTATTTTCATGGCCAAATACCCCTAGAATTCGGCCATCTCCTACTTCTCAATGTCATTGAATTACCTTACAACAATCTCAGTGGTACACTTCCACCACAGCTGGGTAATCTTCACCGTCTACAAATTTTAGACTTTTCAGTCAATAATCTCACAggtaaaattcctccatcatttggcaatctctcttctcttaaaaaattttccttggcaAGGAACGGTTTGGGGGGTGAGATTCCAACTGAACTTGGTAATCTCCACAATCTTTCCACTCTTCAACTCTCTGAGAACAATTTCTCTGGCGAGTTTCCCTCTTCTATCTTCAACATCTCTTCCTTGGTCTTCTTATCCGTGACAAGCAACAATTTATCAGGCAAGTTAACACAAAATTTTGGAACTGATCTTCCAAATATAGAAAATCTATTTCTGGCTAGCAATAGATTCGAAGGGGTAATTCCTAATTCCATATCCAATGCCTCACATCTTCAATACATTGACCTTGCTCACAATAAATTTCACGGTTCCATACCTCTATTCCACAACTTGAAAAACCTTACCAAACTCATTCTTGGTAATAACTTTTTCACTTCCACGACCTCACTGAATTCTAAGTTCTTTGAATCCCTTAGAAACTCCACCATGTTGCAAATTCTGATGATCAATGATAACCATTTGACTGGGGGCCTTCCAAGCTCTGTTGCTAATCTGTCTGGCAATCTTCAACAATTCTGTGTTGCTAACAATTTGCTAGCTGGTACCCTTCCTCAAGGAATGGAGAAATTTAAAAATCTTATATCCTTGTCTTTTGAAAACAATTCTTTCACTGGAGAGTTACCATCAGAAATAGGAGCACTACATAATCTAGAGCGACTTGCAATATACAGCAACAGATTGTCAGGGGAAATTCCAGACATTTTTGGCAATTTCACAAATATGTTTTTCCTTGCAATGGGAAATAATCAGTTCTCGGGTAGAATTTACCCAAGTATTGGACAATGCAAGAGATTAACTTTTCTTGACTTGGGAATGAATCGGCTAGGTGGGTCCATACCAGAGGAGATTTTTCAGCTTTCTGGTTTAACAGCCTTGTATTTAGAAGGAAACTCTCTGCATGGTTCGCTTCCTCATGAGGTCAAAATCATGACACAGCTTGAGACCATGGTCCTCTCTGGCAACCAGTTGTCAGGGAATATTTCTAAGGAAATAGAGGGTTTGTCTAGCTTGAAGTGGCTTCTGATGGCAGGAAACAAATTCAATGGTTCAATCCCAACCAATCTAGGGAATTTAGCATCCCTTGAGACTTTGGATTTATCATCAAACAATCTCACCGGTCCTATTCCTCAAAGTTTAGAAAAGCTCCAGTATATACAGACATTAAATTTGTCTTTCAACCATTTGGAAGGGGAGGTTCCAATGAAAGGTGTTTTTATGAACCTTACCAAGTTTGATCTTCGAGGTAACAACCAACTGTGCAGCCTTAACAAGGAAATAGTGCAGAATTTGGGAGTTCTCCTGTGCGTTGTTGGCAAAAAGAAAAGAAATAGCTTACTCCACATCATCCTTCCAGTTGTTGGTGCTACTGCTTTGTTCATTTCAATGCTCGTTGTGTTTTGCACAATCAAGAAGAAAAGAAAGGAGACGAAAATCAGTGCGTCATTGACCCCTCTCAGAGGGTTGCCTCAAAACatatcttatgctgatattctgattgccacaaacaattttgcagctgaaaacttgattggaaaaggaggctttggctcagtgtacaagggtgcgttcaggttcagcactggtgaaaccgccacccttgctgtcaaagtcctggacctgcaacaaagcaaagcttctcagagtttcagttctgaatgtcaagctttaaaaaatgttcgacaccgaaacctagtgaaggttatcacttcttgctccagccttgattataagggagaggaattcaaggcccttgttatggaattcatgcccaatggtaacttggacgtgagtctataccccgaagatgttgagtcaggatcctctctaaccttgttgcaaagattgaacattgccattgatgttgcctctgctatggactacttgcaccatgactgtaatccaccggtagtgcattgtgatatgaaacctgccaatgtccttctagatgaaaatatggtagcacatgttgcagattttggattggcaaggtttctatctcaaagtacatcagagatgcagagtagcactctaggactgaaaggatcaataggctatattgcccctgaatatggtctaggagccaaggcttcaactcggggcgatgtgtatagttttgggatcctactgctagagatgttcacagccaaaagaccaactgatgaaatcttcaaagaaggattaagcctaagcaaatTTGTCTCAGCCATGGATGAGAATGAAGTACTAAAGGTTGCCGATCGAAGTCTTATTGTTGATTATGAATATTCAACTCAAAGCTCTATCACCGGTGATCAAAGCAGTGGCATTGGCAGCAACACACATTGGATTCGTAAAGCTGAGGAGTGCATAGCTGGTGTGATAAGAGTTGGGTTGTGTTGCACAGCTCAAGAACCTAAAGATCGATGGAGCATGAGAGAGGCCATAACAAAATTGCAAGCAATTAAGCACTCTATGTTGGCCTTGTGA 2982 0.2998 MIYNIRHILLLFFLLHNFHDILCNNDTDKDVLLSFKSQVSDPKNVLSGWSSDSNHCTWYGVTCSKVGKRVQSLTLPGLALSGKLPARLSNLTYLHSLDLSNNYFHGQIPLEFGHLLLLNVIELPYNNLSGTLPPQLGNLHRLQILDFSVNNLTGKIPPSFGNLSSLKKFSLARNGLGGEIPTELGNLHNLSTLQLSENNFSGEFPSSIFNISSLVFLSVTSNNLSGKLTQNFGTDLPNIENLFLASNRFEGVIPNSISNASHLQYIDLAHNKFHGSIPLFHNLKNLTKLILGNNFFTSTTSLNSKFFESLRNSTMLQILMINDNHLTGGLPSSVANLSGNLQQFCVANNLLAGTLPQGMEKFKNLISLSFENNSFTGELPSEIGALHNLERLAIYSNRLSGEIPDIFGNFTNMFFLAMGNNQFSGRIYPSIGQCKRLTFLDLGMNRLGGSIPEEIFQLSGLTALYLEGNSLHGSLPHEVKIMTQLETMVLSGNQLSGNISKEIEGLSSLKWLLMAGNKFNGSIPTNLGNLASLETLDLSSNNLTGPIPQSLEKLQYIQTLNLSFNHLEGEVPMKGVFMNLTKFDLRGNNQLCSLNKEIVQNLGVLLCVVGKKKRNSLLHIILPVVGATALFISMLVVFCTIKKKRKETKISASLTPLRGLPQNISYADILIATNNFAAENLIGKGGFGSVYKGAFRFSTGETATLAVKVLDLQQSKASQSFSSECQALKNVRHRNLVKVITSCSSLDYKGEEFKALVMEFMPNGNLDVSLYPEDVESGSSLTLLQRLNIAIDVASAMDYLHHDCNPPVVHCDMKPANVLLDENMVAHVADFGLARFLSQSTSEMQSSTLGLKGSIGYIAPEYGLGAKASTRGDVYSFGILLLEMFTAKRPTDEIFKEGLSLSKFVSAMDENEVLKVADRSLIVDYEYSTQSSITGDQSSGIGSNTHWIRKAEECIAGVIRVGLCCTAQEPKDRWSMREAITKLQAIKHSMLAL 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02206 993 ProSiteProfiles Protein kinase domain profile. 676 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g02206 993 SMART serkin_6 676 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g02206 993 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515
Gma04g02206 993 Pfam Leucine Rich Repeat 532 554 IPR001611 GO:0005515
Gma04g02206 993 Pfam Protein tyrosine and serine/threonine kinase 679 895 IPR001245 GO:0004672|GO:0006468
Gma04g02206 993 SUPERFAMILY L domain-like 26 297 - -
Gma04g02206 993 SMART LRR_typ_2 530 554 IPR003591 -
Gma04g02206 993 SMART LRR_typ_2 236 259 IPR003591 -
Gma04g02206 993 SMART LRR_typ_2 482 506 IPR003591 -
Gma04g02206 993 SMART LRR_typ_2 386 409 IPR003591 -
Gma04g02206 993 SMART LRR_typ_2 434 458 IPR003591 -
Gma04g02206 993 SMART LRR_typ_2 187 211 IPR003591 -
Gma04g02206 993 SMART LRR_typ_2 139 162 IPR003591 -
Gma04g02206 993 SMART LRR_typ_2 283 309 IPR003591 -
Gma04g02206 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Gma04g02206 993 PANTHER RECEPTOR-LIKE PROTEIN 55 4 87 - -
Gma04g02206 993 PANTHER RECEPTOR-LIKE PROTEIN 55 162 983 - -
Gma04g02206 993 PANTHER RECEPTOR-LIKE PROTEIN 55 80 183 - -
Gma04g02206 993 Pfam Leucine rich repeat 237 294 IPR001611 GO:0005515
Gma04g02206 993 SMART LRR_sd22_2 139 165 - -
Gma04g02206 993 SMART LRR_sd22_2 482 508 - -
Gma04g02206 993 SMART LRR_sd22_2 386 412 - -
Gma04g02206 993 SMART LRR_sd22_2 530 559 - -
Gma04g02206 993 SMART LRR_sd22_2 236 262 - -
Gma04g02206 993 SMART LRR_sd22_2 283 304 - -
Gma04g02206 993 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 162 983 - -
Gma04g02206 993 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 87 - -
Gma04g02206 993 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 80 183 - -
Gma04g02206 993 SUPERFAMILY L domain-like 340 595 - -
Gma04g02206 993 Gene3D Ribonuclease Inhibitor 280 598 IPR032675 -
Gma04g02206 993 SUPERFAMILY Protein kinase-like (PK-like) 658 983 IPR011009 -
Gma04g02206 993 Gene3D Phosphorylase Kinase; domain 1 659 760 - -
Gma04g02206 993 Gene3D Ribonuclease Inhibitor 24 172 IPR032675 -
Gma04g02206 993 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Gma04g02206 993 Gene3D Ribonuclease Inhibitor 173 279 IPR032675 -
Gma04g02206 993 ProSitePatterns Protein kinases ATP-binding region signature. 682 708 IPR017441 GO:0005524
Gma04g02206 993 Gene3D Transferase(Phosphotransferase) domain 1 761 991 - -
Gma04g02206 993 ProSiteProfiles Leucine-rich repeat profile. 532 555 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02206 Gma-Chr4 52457628 52460840 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02206 16 988 Receptor kinase-like Gene Family AT3G47570 40.851 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gma04g02206 PK_Tyr_Ser-Thr 3.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02206 - - gmx:100802571 1955.64