Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02187 ATGGTGTTGGCACTTGCTTTGTCCGCAAACCGTTCATGTTTGTGTTCTTCTACCACCTTTCATCCACACCCACTATTAAATCCTTCACCCTCCCTCCATTTTTCACCTTCAACCTTCCATCCTCAACCCCTATGCTCCCTCATCAAACAACACATCATACCACAACCGTCACACAAGGCCTCCATTCACCGCCGCCGCTGCAGTAACTCCCTCGCCACTGCCGACGCCCAATTCGCATCAATCATTGCTCTGTTTCAAGATATTGGAATCGGCTTTGAAGAGACCCAAGTCCTCTTGTGCAACAACCATGACCTAGCCTCTGTGCCAATTGACTCATTGCACGTTCGCTTTCTCTCTCTGCGCTCTCTTGGCTTCGACCCTCTCACTCTCTGCAAATTAGTCACAAAGCGCCCAACCATATTAACAGCCAACGAAATTGACCCTTTGTTAACCTTTCTGAGAGACAATTTGCAAGGAAAACTCGAGAAACAGCAACTCAATCGCCTCTTATCTTCTACGGAGCAAGAATTCTTGGAGAGTTTTCCTCAGAAGGTTCAATTCCTAGTTGACCGAGGAATCCCCGTTGACCAGGTTGTGCACGTGCTAAACAAAGTGAATTTGTCAAAGGTCTTGTGTCGCAGGTCGCTTGAAGAAATCGACAGAACCATATCTTTCTTAGAACCTTTTGGTGGCATTGCTTTGATTCTGAAACGTCCTCAAATTTTGAACCATGATTTGGATACTCAAATTGTTCCTAGAGTCAAATTTCTGATGGAGCTTAGTGATGGAGATGAAGATAGTGTTGGGAAAGTGCTGCTTAGGTTTCCCATATTCTTGAATTACAGTGTGGCACATGTGGAGGAACACGTAGGGTTTCTGAGTTCTTTTGCCGAGTTTGATTACAAACAGATATTTAGGATAATACAAGTTTACCCGGCTATTGTTACTACTAGCAGAGAGAGGAAACTGCGTCCTAGAATACAGTTTCTCAAGGAATGTGGGTTGGATTCTGATGAGATCTTCAAGTTCTTGATTAAAGGGCCCACGTTTCTGAGCATTTCATTCAATGAGAACATCGCTTATAAGCTGGTGTTGCTGGTGAAGATTGGCTATAGGTATAGGTCAAAGGACTTGGCAATGGCGATTAGGTCTGCTACTAGGACAAACTGTGGGAACATGCAGAAGGTCATTAGTTTGTTCTTGAATTATGGGTTTTCGTGTGAAGACATTGTTGCTATGAGCAAGAAGCAGCCACAGATACTGCAGTATAATCACACCTCTTTGGAGAAGAAGATGGAGTACTTGATAGAGGAGATGGGGCGGGACATTGAGGAGTTGCTGCTTTTTCCTGCATTTCTTGGGTACAAGCTTGATGATAGGATTAAGCATAGGTTTGAAGTCAAGAAGCTTGTTAGAGGCAGGGGAATGTCTATCAATAAGCTTTTAACTGTTTCTGAGGAGACATTTGCTGGCAAACGAAAAAAGGTCATGCCGTAG 1497 0.4402 MVLALALSANRSCLCSSTTFHPHPLLNPSPSLHFSPSTFHPQPLCSLIKQHIIPQPSHKASIHRRRCSNSLATADAQFASIIALFQDIGIGFEETQVLLCNNHDLASVPIDSLHVRFLSLRSLGFDPLTLCKLVTKRPTILTANEIDPLLTFLRDNLQGKLEKQQLNRLLSSTEQEFLESFPQKVQFLVDRGIPVDQVVHVLNKVNLSKVLCRRSLEEIDRTISFLEPFGGIALILKRPQILNHDLDTQIVPRVKFLMELSDGDEDSVGKVLLRFPIFLNYSVAHVEEHVGFLSSFAEFDYKQIFRIIQVYPAIVTTSRERKLRPRIQFLKECGLDSDEIFKFLIKGPTFLSISFNENIAYKLVLLVKIGYRYRSKDLAMAIRSATRTNCGNMQKVISLFLNYGFSCEDIVAMSKKQPQILQYNHTSLEKKMEYLIEEMGRDIEELLLFPAFLGYKLDDRIKHRFEVKKLVRGRGMSINKLLTVSEETFAGKRKKVMP 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02187 498 Pfam mTERF 119 366 IPR003690 GO:0003690|GO:0006355
Gma04g02187 498 Pfam mTERF 327 490 IPR003690 GO:0003690|GO:0006355
Gma04g02187 498 PANTHER CGI-12 PROTEIN-RELATED 85 495 IPR003690 GO:0003690|GO:0006355
Gma04g02187 498 Gene3D Transcription termination factor 3, mitochondrial 66 261 IPR038538 -
Gma04g02187 498 Gene3D Transcription termination factor 3, mitochondrial 287 497 IPR038538 -
Gma04g02187 498 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF8, CHLOROPLASTIC 85 495 - -
Gma04g02187 498 SMART mt_12 443 475 IPR003690 GO:0003690|GO:0006355
Gma04g02187 498 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Gma04g02187 498 SMART mt_12 305 336 IPR003690 GO:0003690|GO:0006355
Gma04g02187 498 SMART mt_12 411 442 IPR003690 GO:0003690|GO:0006355
Gma04g02187 498 SMART mt_12 232 263 IPR003690 GO:0003690|GO:0006355
Gma04g02187 498 SMART mt_12 341 372 IPR003690 GO:0003690|GO:0006355
Gma04g02187 498 SMART mt_12 131 160 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma04g02187 mTERF 5.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02187 - - gmx:100799904 965.296