Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02173 ATGATATCTTTGTTTCTAGTTTTGTGTAATCAGAGATGCCATCTTAAAGCTAAGGATATCAGGAAGAAGTTTCTCGAGGGCGTTTCCGTTCGATCTGAAAAAGTGAAGGATGAGTTGGTTTTGGATGGAAACCACAATGAGCTTGTTTCTAGGTCTTGCGCTCTCATTAATCAGCTTAAAAATAAGGATATCAGGGAGTTCTTTGATGGTATGGTATTTATGTCAGCGAGCGAAGGGAGCAATATCAGAGAAGAGTAG 258 0.3953 MISLFLVLCNQRCHLKAKDIRKKFLEGVSVRSEKVKDELVLDGNHNELVSRSCALINQLKNKDIREFFDGMVFMSASEGSNIREE 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02173 85 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 6 30 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gma04g02173 85 Gene3D - 23 84 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gma04g02173 85 PANTHER RIBOSOMAL PROTEIN L6-RELATED 25 72 - -
Gma04g02173 85 PANTHER RIBOSOMAL PROTEIN L6-RELATED 6 30 - -
Gma04g02173 85 SUPERFAMILY Ribosomal protein L6 20 73 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gma04g02173 85 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 25 72 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02173 Gma-Chr4 52184285 52184742 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02173 12 85 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 60.759 3.31e-18 73.2