Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02142 ATGGAAGAGGTAATAAATTCGATTCGACGCGCTTGTGTACTGGCCCAAAACCTTGAACAAGACCTACCCAACTTGGCGAACCAACCAGCTATGCTGTCCTTGTCCATTGATCAGATAACTGAGGCTTTCAGTGGTGCCAAGGAAAAGATGTTATTATTCTCCCGACAGAACCAAACCTCGGACGAATCTCCTCCGACGTTGGTTCATGAAACGACCACACAGCAGTCTCAGATGGATGCTAGTCTAATGCAGGAATGGCTAAGGTCTAGTCATGCACTGACAATGGATCAGTTGTTTCAAATGCATCAGTTTCATGCTGCAAGGAGCACGCTGCAGCAGATTGGTGAAATGGGAGGGAAAGATGGGGAAGATTCTGAGAGAAACAAGGGATCTGAAGGGGAAGTGCAGGGAATCCACGCGTCACCCTCGCGGCCACGAAAAAGGGAAGCTAATCAAGAGAAGAGAAAAGTGATGGTTCCTGCCCCACAGTTTGGAAACACGGAGGTGCCACCAGAGGATGGCTACACTTGGAGGAAATATGGCCAGAAAGAAATACTTGGCTCCAAGTACCCAAGGAGTTACTACAGGTGCACACACCAAAAGTTATATGAATGCCAAGCCAAGAAGCAAGTGCAAAGACTTGATCACAACCCTAACATATTCGAAGTAACATATAGAGGAAACCACACATGCCACATGTCCTCCACAGCACCATCATCAGTTCCACCACAACAACTACTGGTGGACATATCACAAAATAATAGTAGCACCATTTCCTCTCAGTTGTCTCCTACAATGAACCTCAGCCTCCACCCTGGTGGCGGAGGCGCCGCCAGCAGTGGCAGTGGTGGAGCCTCCACTTCAAGATACGGTGGTGATTATCCTGTGGTGGATATGGCTGATGCTATGTTCAACTCTGGTAGCAGCAGTGGTAACAACAGCATGGAATTTCTCTTCTCTCCCGCTGAGATAAAAGTGATCCAAAAATTGAATAGAACAAGAGATGAAGATTAG 1014 0.4734 MEEVINSIRRACVLAQNLEQDLPNLANQPAMLSLSIDQITEAFSGAKEKMLLFSRQNQTSDESPPTLVHETTTQQSQMDASLMQEWLRSSHALTMDQLFQMHQFHAARSTLQQIGEMGGKDGEDSERNKGSEGEVQGIHASPSRPRKREANQEKRKVMVPAPQFGNTEVPPEDGYTWRKYGQKEILGSKYPRSYYRCTHQKLYECQAKKQVQRLDHNPNIFEVTYRGNHTCHMSSTAPSSVPPQQLLVDISQNNSSTISSQLSPTMNLSLHPGGGGAASSGSGGASTSRYGGDYPVVDMADAMFNSGSSSGNNSMEFLFSPAEIKVIQKLNRTRDED 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02142 337 MobiDBLite consensus disorder prediction 119 133 - -
Gma04g02142 337 SUPERFAMILY WRKY DNA-binding domain 168 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma04g02142 337 MobiDBLite consensus disorder prediction 116 175 - -
Gma04g02142 337 ProSiteProfiles WRKY domain profile. 172 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g02142 337 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 268 IPR044810 GO:0003700
Gma04g02142 337 MobiDBLite consensus disorder prediction 141 155 - -
Gma04g02142 337 Gene3D WRKY domain 161 234 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma04g02142 337 PANTHER WRKY TRANSCRIPTION FACTOR 55 1 268 - -
Gma04g02142 337 SMART WRKY_cls 171 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g02142 337 Pfam WRKY DNA -binding domain 172 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g02142 337 MobiDBLite consensus disorder prediction 257 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02142 Gma-Chr4 51901084 51904988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02142 1 319 WRKY Transcription Factor Family AT2G40740 40.367 5.57e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma04g02142 WRKY 1.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02142 - - gmx:100792150 634.409