Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02137 ATGTCCTCCGAAGACATCACTCTCGTACCCGACCAGAGGATCGAGAACGGTCTCAATTCCCCTCTCGTCTTCCAAGACGACCCTCTCCGCTTCAATTGCCCCACCCCGCACCAGCGTCGGGTCGGGGACCCGCCTCCGAAGACCCGCGAACTTGGCGCCTTCATCGACGACAACAAGATGTTCATCGACCGCGACCGCTTCTTCGCCGCCGCCCAGAACCCCGAATTCCGCCGCTACGCCGACTGCTCCGCCCGCCGCGACCCGCCCCACGCCCGCAATTGGAGCGCCACAgacgatgacgaagagtctgacgacgacgacgaagatgacgacgacgatgaagCGGATGACACCGAAGTAGGAGGACTCGTTGGTGATGGAACCAAAAGCGAACTTAACAACAACAACAACAACAACGGTGGCGCTAATTTACCTGCTGTTGCAAACGGGAAAGCCCACTCTTACGTTTCTGGAAGAGAGCTATTGGTGAAGGATGGTGGTGATATTGGGCAATTGGTGCATAGCAATGTGAGTGGTGGTGATGAAGATCATCGGCAAGAGGGGTTAGGTAAGTCTCAGAATTCAGTTACCGTTGCTGAAACTGACTGTGAGGAGTACTATTCGCACTATCTTCACGGCGGCGAAGGGGCTTCTGGGCAGAAAGTGATGGTGGATGATAGTGGTTGTGGGTTTAGTGGGAGGAAGGATGCTATGTATTCGAGCGAGTCAGGGGAGTCACTCAGGGCAATTCTTTCAGATCCTGTCACGGGTGCTCTTATGGATGATGCTATGATATTACCATGTGGACATTCATTTGGTGGAGGTGGAATAGAGCATGCTATTAGAATGAAAGCTTGCTGCACTTGTTCTCAACCCACAACTGAGGAATCAATATCTCCAAACCTATCACTCCGGATTGCTGTGCAGGCATATCGTCGTGAAGAGGAGTCACAATTTTACCGGTCACCTAAAAGAAGAAGAGAGAGATTTGATCAGGGTGGTTTTGGAGATTCAGTTGTTATGGAACCATCAAGGAGTAGAGGTGTTCAGTTTCCATTTGCTGTGATGGACCGGGTTATCATAAAGGGAAATAAAAGGACACCACAACGCTTTGTTGGGCGCGAAGCTATTGTTACAACGCAATGCCTGAATGGATGGTATGTGGTGAAGACATTGGACAATGCAGAGAGTGTAAAGTTGCAGTATCGATCCCTTGCCAAGGTTATGGATGATCCTTCAAAACCTGCAGCCTCCAGCAAGATGCCACCTAATTGGCTTTAG 1281 0.4871 MSSEDITLVPDQRIENGLNSPLVFQDDPLRFNCPTPHQRRVGDPPPKTRELGAFIDDNKMFIDRDRFFAAAQNPEFRRYADCSARRDPPHARNWSATDDDEESDDDDEDDDDDEADDTEVGGLVGDGTKSELNNNNNNNGGANLPAVANGKAHSYVSGRELLVKDGGDIGQLVHSNVSGGDEDHRQEGLGKSQNSVTVAETDCEEYYSHYLHGGEGASGQKVMVDDSGCGFSGRKDAMYSSESGESLRAILSDPVTGALMDDAMILPCGHSFGGGGIEHAIRMKACCTCSQPTTEESISPNLSLRIAVQAYRREEESQFYRSPKRRRERFDQGGFGDSVVMEPSRSRGVQFPFAVMDRVIIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVMDDPSKPAASSKMPPNWL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02137 426 MobiDBLite consensus disorder prediction 98 120 - -
Gma04g02137 426 SUPERFAMILY RING/U-box 245 318 - -
Gma04g02137 426 MobiDBLite consensus disorder prediction 80 145 - -
Gma04g02137 426 MobiDBLite consensus disorder prediction 80 97 - -
Gma04g02137 426 MobiDBLite consensus disorder prediction 128 144 - -
Gma04g02137 426 ProSiteProfiles U-box domain profile. 246 318 IPR003613 GO:0004842|GO:0016567
Gma04g02137 426 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 246 316 IPR013083 -
Gma04g02137 426 MobiDBLite consensus disorder prediction 174 193 - -
Gma04g02137 426 MobiDBLite consensus disorder prediction 1 49 - -
Gma04g02137 426 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62 64 426 - -
Gma04g02137 426 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 64 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02137 Gma-Chr4 51839117 51844470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02137 192 426 Plant U-box Gene Family AT5G05230 61.157 2.72e-90 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02137 - - gmx:100791099 815.839