Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02129 ATGGTGGCTGAAATTATTGATCTTTCAGACTCCCCTCCATCATCACCCAGTTCATCTCATAATACTGCAGCAAGAATTCTCAATTTTGATTCTGTTTCTAATGGAAAAATTCAATTTGAGAAAGTTATTCCTATATCCTTAATGGCTTGCACAAATACCAACCAGCCACAAAGTACTCTATGGGCAGCTTCAGGACATACCAATGAGCACTCTCAGATTGCTACTACATTCCAACCCAGTATGCAACAAAGGGTTGCTACAGTACTTGAACCAGTACCTGAATCAATCACATGCATGTTTCCTCATGGAGCTAGACTCAAGGAGCCCTGGACTCACAGAGAACATGAGCTATTTTTGATGGGGCTAATCAAGTATGGAAGAGGTCACTGGAGCAAAATTGCTAGACAGTTTTTGTTGAATAAGACACCACATCAAGTTCAGAGCTATGGTGCTAGCTTCTTCAGGCACCTACCATCTACACACCTACATGGTTTTAGGAGAAGGAAGCCAACCTACTCAACATCTAGCCTCATGCCCAAAAACAACAATCTTATGGCTGCATCTGTCTCCATGCCTATGATTGTTAATGAGCTACAACAACAAACTCACATGCTTTTCCCGGAGAATGCTCCTTTCCTTCTGGCCCCATCACATGGAGAAGCAAGTAGCAGCAACAACACCACCATGTATGGGTTCCAGGTGCAAACAGGTGGTGCAAGAACATCCATGAATGCTAGTGCTAATGGAGAAGTTGATTTGGAACTGCGTTTGGGTTGA 777 0.4311 MVAEIIDLSDSPPSSPSSSHNTAARILNFDSVSNGKIQFEKVIPISLMACTNTNQPQSTLWAASGHTNEHSQIATTFQPSMQQRVATVLEPVPESITCMFPHGARLKEPWTHREHELFLMGLIKYGRGHWSKIARQFLLNKTPHQVQSYGASFFRHLPSTHLHGFRRRKPTYSTSSLMPKNNNLMAASVSMPMIVNELQQQTHMLFPENAPFLLAPSHGEASSSNNTTMYGFQVQTGGARTSMNASANGEVDLELRLG 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02129 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 158 IPR017930 -
Gma04g02129 258 SUPERFAMILY Homeodomain-like 109 157 IPR009057 -
Gma04g02129 258 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 107 150 IPR006447 GO:0003677
Gma04g02129 258 Pfam Myb-like DNA-binding domain 107 149 IPR001005 -
Gma04g02129 258 MobiDBLite consensus disorder prediction 1 21 - -
Gma04g02129 258 CDD SANT 109 149 IPR001005 -
Gma04g02129 258 ProSiteProfiles SANT domain profile. 105 158 IPR017884 -
Gma04g02129 258 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 20 258 - -
Gma04g02129 258 Gene3D - 108 158 - -
Gma04g02129 258 ProSiteProfiles Myb-like domain profile. 107 154 IPR001005 -
Gma04g02129 258 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 20 258 - -
Gma04g02129 258 SMART sant 106 156 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02129 Gma-Chr4 51770686 51772133 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma04g02129 Myb_DNA-binding 9.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02129 - - gmx:102665898 498.434