Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02117 ATGGCTTCGTTTTGTTCTAGATTGACAATTTGTTTGGCTCTGTTTGTCCTCATATGGGGGAGTGCCAATGCACAACTTTCTACAAACTTTTACTACCATTCATGTCCAAACCTCTTCTCCTCTGTGAAATCCACAGTGCAATCTGCCATATCTaaggagacccgcatgggtgcttctctccttcgcttgttcttccacgattgctttgtcaatggatgtgatggttcaattctattggatgacacatcaagcttcaccggagagaagaacgcaaaccccaacaggaactctgctcgtggattcgaggttattgacaacattaaatcagccgtggagaaagtgtgtccaggagttgtttcctgcgcagatatccttgccatcgctgccagagactctgttCAGATTCTTGGAGGCCCTACATGGAATGTTAAACTTGGAAGAAGAGACGCTAGAACTGCTAGCCAATCTGCTGCTAACAATGGCATCCCTGCACCCACTTCAAACCTTAACCAACTCATCTCAAGATTTAGCGCTCTTGGACTTTCCACCAAGGACTTGGTCGCCTTGTCCGgtggtcacacaattggacaagcaagGTTGATGGGTGGAGAAGACGTAATTGCTACCGCCGTCAACGGAGGAAGGAGCAAAGATGTCTCACACTGGATAGCCACTTTGGCTTTGGCACCTATGTTACTCTCTCCTAAGAGGAGACAATCAATAAAGAGTTCATTGGGATTCAGAAGCTTCTCTTTGATGTTTGTGACTATTCTTGTTGGGTACAATTTGCCAAAATCAATTCAAGTAGATTTTTTGGGCATGTTGGATGATCCTGCAGGTACCAATTGCTTCATGCTGTCCTGA 864 0.3032 MASFCSRLTICLALFVLIWGSANAQLSTNFYYHSCPNLFSSVKSTVQSAISKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGFEVIDNIKSAVEKVCPGVVSCADILAIAARDSVQILGGPTWNVKLGRRDARTASQSAANNGIPAPTSNLNQLISRFSALGLSTKDLVALSGGHTIGQARLMGGEDVIATAVNGGRSKDVSHWIATLALAPMLLSPKRRQSIKSSLGFRSFSLMFVTILVGYNLPKSIQVDFLGMLDDPAGTNCFMLS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02117 287 CDD secretory_peroxidase 25 199 IPR033905 GO:0004601|GO:0042744
Gma04g02117 287 PANTHER PEROXIDASE 72-RELATED 8 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma04g02117 287 PANTHER PEROXIDASE 8 200 - -
Gma04g02117 287 ProSiteProfiles Plant heme peroxidase family profile. 25 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma04g02117 287 Pfam Peroxidase 42 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma04g02117 287 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Gma04g02117 287 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma04g02117 287 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma04g02117 287 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma04g02117 287 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma04g02117 287 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma04g02117 287 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma04g02117 287 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma04g02117 287 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma04g02117 287 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma04g02117 287 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma04g02117 287 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Gma04g02117 287 Gene3D Peroxidase, domain 2 163 201 - -
Gma04g02117 287 SUPERFAMILY Heme-dependent peroxidases 25 199 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma04g02117 287 Gene3D - 29 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02117 Gma-Chr4 51645860 51652367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02117 24 199 Peroxidase AT5G05340 81.250 1.06e-102 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02117 K00430 - gmx:100803637 396.741