Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma04g02103 | ATGGACTTGGCCGCGAAGCTTCACCACTTAGACCTGACCGGCGTGGTCATTTTGGACGCCCGAAAGCCCTCCGCACTCCGCCACCTTCCGCCACGCGTTCTCAGCAGAACAAACACCAACACCAATTTGATTTACACGAACCGGTTCTCGGGCCCACCGAGGCCCAATTCCGCTTCCTCAACGGGCCTGTCCATGATAACCGTCGAGGACGATATCGAGTCTCTTTTCTCCGAGACGAACTCGGAGGAGGAGCGGCGCGTGAGGAAGCAACCTAGCATTGGGGCGTCGGGGATTTCCTCCGGGGTGAAGCTCGAAAACGTGGGGAAAGCCTACAAGGGCGTGACGGTGCTGAAGGACGTGAGCTGGGAGGTGAAGAAGGGGGAGAAGGTGGGCCTGGTCGGCGTGAACGGCGCCGGGAAGACGACGCAGATGAGGATAATCGCGGGCCTTGAGGAGCCGGATTTCGGGAACGTGGTGAAGGCGAAGGCGAACATGAAAATCGCGTTTCTGAACCAGGAGTTCGAGGTGGCGCCGAGCAGGACGGTGAGGGAGGAGTTCATGAACGCATTCAAGGAGGAGATGGAGGTGGCAGGGAAGCTGGAGAAGGTGCAGAAGGCGCTCGAGGGTGCCGTTAATGATTTGGAGCTCATGGGGAGGCTCTTGGATGAGTTCGATTTGCTTCAGAGGAGGGCGCAGAATGTGAACTTGGATGAGGTTGATGCCAAGATTAGTAAGTTGATGCCTGAGCTTGGTTTTGCTCCTGAGGATTCTGATAGGCTGGTCGCGTCTTTCAGTGGAGGCTGGCAGATGAGGATGTGTCTCGGCAAGATTCTACTTCagGAGCCTGATTTGTTGCTGTTAGATGAGCCTACAAATCACCTTGATCTTGACACCATTGAGTGGCTTGAAGACTATCTTAACCAGCAGGATGTTCCAATGGTTATCATATCCCATGATCGAGCTTTTCTTGATCAGCTGTGTACAAAAATTGTGGAAACTGACATGGGTGTGTCCAGGACGTTTGAGGGGAATTACTCTCAGTATGTAATTTCAAAAGCAGCATGGATTGAAGCACAGTATGCTGCATGGGAGAAGCAGCAGAAAGAAATTGAGCAGACAAGAGACTTGATAAGTAGATTAGGTGCTGGAGCAAATTCTGGCCGTGCTTCTTCTGCCGAGAAGAAGCTGGAGAGACTTCAGGAAGAGGAACTAGTGGAGAAACCTTTTGAACGGAAACAAATGAAAATCAGGTTCCCTGAGCGTGGAAGGAGTGGAAGATCTGTTGTAGCAATTAATAACTTGGAATTTGGCTTTGAGGATAAGACACTTTTCAAAAAGGCAAATCTTACAATTGAAAGGGGAGAAAAAATTGCCATTATTGGTCCAAATGGATGTGGCAAGAGTACTTTACTGAAATTGATTATGGGTTTGGAAAAGCCAACCGGGGGTGAAGTTTTGCTTGGGGAGCATAATGTATTACCTAACTATTTTGAGCAGAATCAGGCTGAGGCACTTGATCTGGAAAAAACAGTGCTCGAGACAGTAGAGGAAGCTGCAGAGGACTGGAGGATTGATGATATTAAAGGGCTTCTTGGGCGTTGTAATTTTAAAGCTGATATGCTTGACCGAAAAGTTTCACTATTGAGTGGTGGTGAGAAGGCACGGCTGGCCTTTTGCAAATTCATGGTAAAGCCATCAACTATGCTTGTGTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTCGAGGAAGCAATAAATGAATACCAGGGCACTGTTATCACAGTATCTCATGACCGATACTTTATAAAGCAAATAGTTAATAGAGTGATAGAAATTAAAGATGGCACCATACAGGATTATGCAGGTGATTACGATTATTATTTAGAGAAGAATTTTGATGCTAGGGAAAGAGAACTTGAACGCGAGGCTGAGCTTGATAGCAAAGCTCCTAAAGTGAAAGCCAAATCTAAGATGTCCAAGGCTGAGAAAGAGGCACGGAAGAAACAAAAGATGCAGGCCTTTCAGGCAGCAAAACAGAAGTCCAAAGGCGTGAAAAATGCCAAGAGATGGAATTGA | 2091 | 0.4773 | MDLAAKLHHLDLTGVVILDARKPSALRHLPPRVLSRTNTNTNLIYTNRFSGPPRPNSASSTGLSMITVEDDIESLFSETNSEEERRVRKQPSIGASGISSGVKLENVGKAYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQMRIIAGLEEPDFGNVVKAKANMKIAFLNQEFEVAPSRTVREEFMNAFKEEMEVAGKLEKVQKALEGAVNDLELMGRLLDEFDLLQRRAQNVNLDEVDAKISKLMPELGFAPEDSDRLVASFSGGWQMRMCLGKILLQEPDLLLLDEPTNHLDLDTIEWLEDYLNQQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTFEGNYSQYVISKAAWIEAQYAAWEKQQKEIEQTRDLISRLGAGANSGRASSAEKKLERLQEEELVEKPFERKQMKIRFPERGRSGRSVVAINNLEFGFEDKTLFKKANLTIERGEKIAIIGPNGCGKSTLLKLIMGLEKPTGGEVLLGEHNVLPNYFEQNQAEALDLEKTVLETVEEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTMLVLDEPTNHLDIPSKEMLEEAINEYQGTVITVSHDRYFIKQIVNRVIEIKDGTIQDYAGDYDYYLEKNFDARERELEREAELDSKAPKVKAKSKMSKAEKEARKKQKMQAFQAAKQKSKGVKNAKRWN | 696 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma04g02103 | 696 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 429 | 644 | IPR003439 | GO:0005524 | |
Gma04g02103 | 696 | MobiDBLite | consensus disorder prediction | 646 | 676 | - | - | |
Gma04g02103 | 696 | MobiDBLite | consensus disorder prediction | 646 | 696 | - | - | |
Gma04g02103 | 696 | Gene3D | - | 391 | 658 | IPR027417 | - | |
Gma04g02103 | 696 | SMART | AAA_5 | 126 | 341 | IPR003593 | - | |
Gma04g02103 | 696 | SMART | AAA_5 | 453 | 621 | IPR003593 | - | |
Gma04g02103 | 696 | Pfam | ABC transporter | 445 | 576 | IPR003439 | GO:0005524 | |
Gma04g02103 | 696 | Pfam | ABC transporter | 117 | 292 | IPR003439 | GO:0005524 | |
Gma04g02103 | 696 | Gene3D | - | 99 | 383 | IPR027417 | - | |
Gma04g02103 | 696 | ProSitePatterns | ABC transporters family signature. | 548 | 562 | IPR017871 | GO:0005524 | |
Gma04g02103 | 696 | PANTHER | ATP-BINDING TRANSPORT PROTEIN-RELATED | 51 | 686 | - | - | |
Gma04g02103 | 696 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 103 | 337 | IPR027417 | - | |
Gma04g02103 | 696 | Pfam | ABC transporter | 331 | 418 | IPR032781 | - | |
Gma04g02103 | 696 | CDD | ABCF_EF-3 | 431 | 621 | - | - | |
Gma04g02103 | 696 | PANTHER | ABC TRANSPORTER F FAMILY MEMBER 5 | 51 | 686 | - | - | |
Gma04g02103 | 696 | Coils | Coil | 656 | 685 | - | - | |
Gma04g02103 | 696 | CDD | ABCF_EF-3 | 102 | 332 | - | - | |
Gma04g02103 | 696 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 409 | 635 | IPR027417 | - | |
Gma04g02103 | 696 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 102 | 360 | IPR003439 | GO:0005524 | |
Gma04g02103 | 696 | ProSitePatterns | ABC transporters family signature. | 264 | 278 | IPR017871 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma04g02103 | Gma-Chr4 | 51513246 | 51518524 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma04g02103 | 426 | 646 | Calmodulin-binding Proteins | AT2G36910 | 25.506 | 3.34e-13 | 71.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma04g02103 | - | - | gmx:100796907 | 1288.09 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma04g02103 | 04 | 51513246 | 51518524 | Gma06g01310 | 06 | 12297299 | 12301083 | GST |