Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02101 ATGGATTACTATTTTGGAAACCCTAATCCTAAACCTTATGATAACCGTCACTCTGCCGTAGTGAACACGGAATCTCCTTCCTCCGAGTTCATGCTATCTGATTATCTCGTGTTGGAAGATGCTGTCGATAATCAAGAGTCTTGGTCACAAAGCACTGAAACTGAATCATCGGAGAAAGGAAACTCCAGCGATGTCAGTCATGGGTTTGGTGATGCAACCTTCAGCAACACCAACATGCATATAAAGTGCGAAAATAATGGGATAAAGCGAAAGAAGGAAGAAGTGAGTCAAATGATCACGTTTAGAACCAGATCGCAGCTTGAGGTTATGGATGATGGATATAAATGGAGGAAATACGGAAAGAAGACAGTGAAGAACAATCCCAACCCAAGGAACTACTACAAGTGTTCAGGTGAAGGATGCAATGTGAAGAAAAGGGTGGAAAGAGACAGGGATGACTCGAACTATGTTTTAACAACGTACGACGGTGTCCACAATCATGAGAGCCCGTCGACTGCCTACTACAGCCAAATTCCCTTGGTGCATTCTAACCATGATTGGCCCCAGCTgcacccttctgcaaactcatga 591 0.4213 MDYYFGNPNPKPYDNRHSAVVNTESPSSEFMLSDYLVLEDAVDNQESWSQSTETESSEKGNSSDVSHGFGDATFSNTNMHIKCENNGIKRKKEEVSQMITFRTRSQLEVMDDGYKWRKYGKKTVKNNPNPRNYYKCSGEGCNVKKRVERDRDDSNYVLTTYDGVHNHESPSTAYYSQIPLVHSNHDWPQLHPSANS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02101 196 Pfam WRKY DNA -binding domain 111 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g02101 196 SMART WRKY_cls 110 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g02101 196 Gene3D WRKY domain 94 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma04g02101 196 MobiDBLite consensus disorder prediction 43 73 - -
Gma04g02101 196 ProSiteProfiles WRKY domain profile. 105 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g02101 196 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 11 175 - -
Gma04g02101 196 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 11 175 IPR044810 GO:0003700
Gma04g02101 196 SUPERFAMILY WRKY DNA-binding domain 102 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02101 Gma-Chr4 51496579 51499049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02101 91 189 WRKY Transcription Factor Family AT5G64810 62.626 1.89e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma04g02101 WRKY 6.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02101 - - gmx:732584 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02101 04 51496579 51499049 Gma06g01312 06 12308308 12311836 GST
Gma17g01980 17 35406071 35412670 Gma04g02101 04 51496579 51499049 PCT
Gma14g01105 14 15544992 15551060 Gma04g02101 04 51496579 51499049 PCT