Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02081 ATGAGGTCCTTTCTCCGGAGGTACCACCATTGCTTATACGTGCTTCGCTTGGGGACTCAGGCGCGTGAGTTGTCATCATCATCTCTTCGAAACGTGAAAGTTTCGGTGTGGTGGGATTTTGAGAACTGTCAGTTACCGGCGGGGTTTGATCCTTCCCATGTTACCCCGGCAATCACGAAAGCTGTGAGGGCGAATGGGATTAAGGGTCCTCTTCGAATCAACGCTTTCGGTGATCTCCTCCTCTTCTCTAAGCCCAAACTTCAGGCACTCGCTCACACCGGCATCCATTTCACCCACATCCCCGTTGGAAAGAACAGTGCTGATAGATTTCTTCTTGTCAACCTTATGGATTGGGTTTCCCAGAATCCTCCGCCTGCACATCTATTTTTTATATCTGGTGACACAGACTTTGCTGGAATATTACACAAGTTAAGAATGAATAATTACAATGTATTGCTTGCTACCCCAACGTTTGCATCTGAAGTCTTCCACAGTGCAGCAACGATAATATGGCAATGGTCTTCAATATTAAAGGGGCAATGTCTTTCTGGAAAACATTTTAACCATCCTCCTGATGGTTTGCTTAGTTCTTGGTATGGAAATTATAAGATGCCTGTTGATAAACCGTTCTCGGCTTTGACATCTTCACAAAAGGTGGATATATACGAACCTTCCTCAGATTtacatactattccaaaagtagtacatgctattccaaacgtagtTGTAAGAGAGATTTGGTCTATATTGAGATCACATCCAAAAGGAATCTTAATTGGAGATCTTCGTAAAATGTTGAAGGATCGTAATGTGCATTTTGGTACAAGATTTTTTGGATATCGAACATTTTCTAGCATTCTATATGCTACTCCACAGGTAAAGCTCAAGGATTTAGGTGATGGTAATTTTCATGTATATCTGGTCCCAAAATCTCTCAAACCTTTTGAGGGCAATGCTGTAGAATTGGTAACATCTTGTACTAAGATTGATGAAATGGGATCTGCAGCAACTCCAAAGCTAAACAGTGAGGATAAAGATAAGGCTAGAGAAGAAAATGAGACACCCTTAACTGCCTCATCTCATGAAAGTAGTACGGATGATAATTCAAAATCATTCCAACTGGTCACTTCTCAAGTCAAACCCATGGGAGAAAATGTAGATGCTAAATCATCAATTTCATTGGTTGAAAGAAGTATACCTCAGCCCCCAAATAAGTTGCAGAAATCTTCGGTGTGTAGTGCGAAGGTTGCTGATATGACTACTGCACAACTGTCAAAGATTCAACCACAACTCAAGGACGACCAACTTTCCAAAACTAAGCCAGATTCCTTAAAAATGAGTTCTAAAGGCTCATCTGATGATGACATTGTTGGGTCTGAGAATGCGAGTCGTAAAAGTCAGGAAAGATACACAACTTCAATGAATCGCTCTGCTGGAATTGATCAGACAGCAGTGGATGACATTGGTACTGCAAACCATGAATCTGGAAATTTTAGAGCAATGTACAAATGTGTGAATCCAACTAGAAAGGAGGTTGATAATGTTTGTCACAGCCCATATGCTTTTCCAGTTGATGACTCTCTGGTTGATAAAAAATCTGGTGGAAGTGATGAAACTTATAGGAAAGGTCCAACATTCTTTGGCTGGATCAGAAGCCAGTGGCAATTTTGGAAAGGCAATGCAAAATCTGGTGATTCAACTGCTCATCAGAACAAACTGGTTAATCATTTTGAGGATTCTAACTCATCTGAACTAGTAGACCAGACAGTCCAGACTGTTAGTGATTTTGAAGATAAGTCATCAGAACTGGACCAGAATGCTATTTGTTCTGGAAAGCCTGAGTTGTTTTCTAGCTGTTCCTTTTGGAATGACATGGAATCTTTTATTTTCACCCTCAAAGGATCACTTATTGCTTCCCAGTCAAAAAACAGGGAGGATATGGCACATAAATTACAGAAGGATGGACCCCCAGTTTTTAGATCTCTGCCTGAAAAAGATATCCTTCAATTGTTGGAGTTATTAATATCAGAGAAAAAGTGGTTGGAGGAAAGCCCCACCCAAACATTTCCTTTTCAGCTAACTCAACCAGTTCACAAGAACTCATTGATGGGCCAATCTCATGGTGCAAATGGCTTGAGATCTCTCTTTCTGAGCAGAGATTCACAGTCCTCTTCCCAAAAATCATCTGAACATAATGTGGAGAAACACGATCAGAGTATTCCTTGTACTAGAGTTTCTGCGACCACCACTGAGACGAAATATACAGAGAGGTATGGCTATCATCTTGATTTAGAGAAGCTTGGTTACCAAAAGTTGGCAACCTTACTACAGATAATGCCGGAAGTTAAAGTAGAGTCCAATTATATTTATACTTCTGTTCCTGATGTTAGTGCTTCTGAAGGGGAAACTTTTAATCTTGAAACTCAAGTACCCAATGCTTGTCATGCTCATGCAACCTCGTACTCAGATAGTGAATTATCTGATTCATCCGCCAAAGATGGTAACACAGAATCTCCATGGGAGGAATTCAGTCCCGTTTCTGTCAACAATTCCAACCAGAGTAATCTGGAGTCAGAATTAAGTCAGAAAGCCATGGAACTGCTTGCATCAAAGTGTCCTGATTATGAACCTATAGTCTCAGATTATGATTCTTCTGAATCTGAAGGAGATAGTTTTTGTTTAAATCAACCAAAAGAGCAAGAAAAGCCAAAATGTAACGAACAAGACAGTTATTTTTGGCAAGCTCAGGAGTTGTTACACAGCAGCAAGGAAAGAGAGAATAGTGTTAAGAAGTCAGACAATATTGACATCTCTGACAATTCTCTGGTTGATATTTTTAATTCATCCACTGAGTCAACCCGGGTTACCCTTTCCAAAGAGAAGCCAGGATTTCAAAAGAACTATTCATTTGTTGCTGAACCAGTCTTAACAAGCAAGGACAAGCTGGTAGATGTGATAGTAGATAGCTTTAAAAAAGCTGATGAGTCAAAGACGGAACACTGA 3003 0.3976 MRSFLRRYHHCLYVLRLGTQARELSSSSLRNVKVSVWWDFENCQLPAGFDPSHVTPAITKAVRANGIKGPLRINAFGDLLLFSKPKLQALAHTGIHFTHIPVGKNSADRFLLVNLMDWVSQNPPPAHLFFISGDTDFAGILHKLRMNNYNVLLATPTFASEVFHSAATIIWQWSSILKGQCLSGKHFNHPPDGLLSSWYGNYKMPVDKPFSALTSSQKVDIYEPSSDLHTIPKVVHAIPNVVVREIWSILRSHPKGILIGDLRKMLKDRNVHFGTRFFGYRTFSSILYATPQVKLKDLGDGNFHVYLVPKSLKPFEGNAVELVTSCTKIDEMGSAATPKLNSEDKDKAREENETPLTASSHESSTDDNSKSFQLVTSQVKPMGENVDAKSSISLVERSIPQPPNKLQKSSVCSAKVADMTTAQLSKIQPQLKDDQLSKTKPDSLKMSSKGSSDDDIVGSENASRKSQERYTTSMNRSAGIDQTAVDDIGTANHESGNFRAMYKCVNPTRKEVDNVCHSPYAFPVDDSLVDKKSGGSDETYRKGPTFFGWIRSQWQFWKGNAKSGDSTAHQNKLVNHFEDSNSSELVDQTVQTVSDFEDKSSELDQNAICSGKPELFSSCSFWNDMESFIFTLKGSLIASQSKNREDMAHKLQKDGPPVFRSLPEKDILQLLELLISEKKWLEESPTQTFPFQLTQPVHKNSLMGQSHGANGLRSLFLSRDSQSSSQKSSEHNVEKHDQSIPCTRVSATTTETKYTERYGYHLDLEKLGYQKLATLLQIMPEVKVESNYIYTSVPDVSASEGETFNLETQVPNACHAHATSYSDSELSDSSAKDGNTESPWEEFSPVSVNNSNQSNLESELSQKAMELLASKCPDYEPIVSDYDSSESEGDSFCLNQPKEQEKPKCNEQDSYFWQAQELLHSSKERENSVKKSDNIDISDNSLVDIFNSSTESTRVTLSKEKPGFQKNYSFVAEPVLTSKDKLVDVIVDSFKKADESKTEH 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02081 1000 PANTHER EMB|CAB71880.1 20 943 - -
Gma04g02081 1000 MobiDBLite consensus disorder prediction 720 744 - -
Gma04g02081 1000 MobiDBLite consensus disorder prediction 425 478 - -
Gma04g02081 1000 CDD PIN_limkain_b1_N_like 33 156 - -
Gma04g02081 1000 Pfam OST-HTH/LOTUS domain 751 786 IPR025605 -
Gma04g02081 1000 Pfam OST-HTH/LOTUS domain 244 304 IPR025605 -
Gma04g02081 1000 Pfam NYN domain 33 168 IPR021139 GO:0004540
Gma04g02081 1000 MobiDBLite consensus disorder prediction 818 853 - -
Gma04g02081 1000 Gene3D - 722 791 IPR041966 -
Gma04g02081 1000 MobiDBLite consensus disorder prediction 441 478 - -
Gma04g02081 1000 MobiDBLite consensus disorder prediction 357 371 - -
Gma04g02081 1000 ProSiteProfiles OST-type HTH domain profile. 238 309 IPR025605 -
Gma04g02081 1000 MobiDBLite consensus disorder prediction 334 371 - -
Gma04g02081 1000 MobiDBLite consensus disorder prediction 340 356 - -
Gma04g02081 1000 PANTHER LIMKAIN B LKAP 20 943 IPR024768 GO:0005777|GO:0010468|GO:1903231
Gma04g02081 1000 Pfam OST-HTH Associated domain 643 690 IPR025677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02081 Gma-Chr4 51301219 51305107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02081 32 179 C2H2 Transcription Factor Family AT5G61190 41.611 1.67e-33 137