Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02064 ATGGATATCAACGAAAGCATCACTTCTACATTCAGCAATGTTGTTAACAGCACTTGGAATCACGAGAAGATGGGAACAGAAGAACATAACATCATCCTCCATGATCATCACCAAATTCCAAAGGGTGTTGGAATTTGGCCCCACTACAACTACCCTCTTCACAATATTCAACCCTCATCCTCATCAAATGTGGCACCCTCTTCGAGTAATTTCCTCACTGATATTCTAGGAGTCCACTTtgaagaagaagaagatgaagaagaagaagaGCTAGGAGCCATGAAGGAGATGATGTACAAAATGGCAGTGATGCAACCGGTGGACATAGACCCTGCAAGCGTGAGAAAACCAAAGAGGAGAAACGTGCGCATAAGCGATGACCCTCAGAGTGTTGCTGCGAGACACAGAAGAGAGAGGATCAGCGAGAAAATTCGCATACTGCAAAGACTGGTCCCTGGTGGAACAAAAATGGACACTGCTTCCATGCTCGATGAAGCCATTCGCTATGTTAAGTTCTTGAAGAGGCAAATCAGGTTTCTTCAATCAACACCACCACCACCAATTAATTGCAATGTTGGTGCTGCTCCTAATAGTGAATATTATTGGCCTTTTGCACCAAATATGTTGCATAGTTCCACCACCACCTTTATTGACATGCCGGTTATTGGAATGGAATTCAACACCAGAAGCCATGGTCATGCCGGTGATTCGATCCACCTTAGACAATCATGA 732 0.4262 MDINESITSTFSNVVNSTWNHEKMGTEEHNIILHDHHQIPKGVGIWPHYNYPLHNIQPSSSSNVAPSSSNFLTDILGVHFEEEEDEEEEELGAMKEMMYKMAVMQPVDIDPASVRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRFLQSTPPPPINCNVGAAPNSEYYWPFAPNMLHSSTTTFIDMPVIGMEFNTRSHGHAGDSIHLRQS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02064 243 Gene3D - 127 184 IPR036638 GO:0046983
Gma04g02064 243 CDD bHLH_AtIND_like 125 182 - -
Gma04g02064 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 124 173 IPR011598 GO:0046983
Gma04g02064 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 182 IPR036638 GO:0046983
Gma04g02064 243 Pfam Helix-loop-helix DNA-binding domain 134 173 IPR011598 GO:0046983
Gma04g02064 243 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 63 208 IPR045843 GO:0003700|GO:0006355
Gma04g02064 243 SMART finulus 130 179 IPR011598 GO:0046983
Gma04g02064 243 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 63 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02064 Gma-Chr4 51098938 51099669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02064 91 187 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 87.129 2.62e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma04g02064 HLH 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02064 - - gmx:100779374 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02064 04 51098938 51099669 Gma06g01354 06 12736974 12737678 GST
Gma05g01877 05 40234542 40235342 Gma04g02064 04 51098938 51099669 PCT
Gma04g02064 04 51098938 51099669 Gma05g01877 05 40234542 40235342 PCT