Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02047 ATGAGGAAATTCACCACCATATTCTCCCACATCAAATCAACAAAGATGAACTTCTCCGTTTCGCTTCTTCATCGGAGCTCTCCATTTTGCCCCAATCAACCACCACACCCTAATTTCAAGAACCTCACATGGCAGAATCGCGATTCACTACTATTATTTCCCCTTCTCTGTTCGCGCCACTTTGCCTCCACTACCGCGCAGAATCCTTCCACATTGAATGCTCTTCAGGATCATTATCAGGCCATTGATTTTCCTGGAGGAGCAGTACAATTCATCCCTGAAATGAGGTTTATATCCGAATCACCTAAAGAGAGAATACCTTGCTACCGTGTCCTTGATGATAATGGGCAACCAATTTTGGGCCATAATTTTGTGCAGGTCAGCAAGGAAGTTGCTGTTAAGATGTATACTGACATGGTCACTCTCCGATCTATGGACACTATCTTCTATGAAGCACAAAGGCAAGGTAGAATATCATTTTATGTGACAGCAATTGGGGAGGAGGCTATCAATGTTGCTTCAGCTGCAGCTCTTGCCATGGACGATGTTGTTTTCCCTCAGTATAGGGAAGCGGGAGTCTTGTTATGGCGTGGTTTCACTCTGCAAGAATTTGCAAACCAGTTATTTTCCAATATATATGATTATGGGAAAGGAAGGCAGATGCCAGCTCATTATGGGTCCAAAAAGCACAATTACTTTACAGTAGCATCAACTATTGCTACACAAATTTCCCATGCTGTTGGAGCCGCTTATTCCTTAAAGATGGATAAAAAGGATGCATGTGCCGTCACTTACTTCGGTGATGGTGGCTCAAGTGAGGGTGATTTCCACGCTGCCTTAAATTTTGCAGCAGTTTTGGAGGCCCCAGTTATTTTTATATGCCGGAACAATGGATGGGCTATCAGCACACCCATTTCAGATCAGTTTCGAAGTGATGGTGTTGTTGTGAAAGGGCAGGCATATGGAGTTCGTAGCATTCGTGTAGATGGCAATgatgccctggctatctatagtgctattcaagctgctcgtcaaatggcaattactgaagagagaccaattctaatagaaGCTCTTACATATAGAGTTGGACACCACACCACATCAGATGACTCTACCAAGTATCGTCCAGCGAATGAGATTGAATGGTGGAGAGtggcacgtgatcctgtggttagatttagaaagtggatagaaaagcatggctggtggaatgatatggctgagtcagagcttataaacaatttgagacagcagCTTCTACATACAATTCAAGAAGCAGAGGGTGTAGAAAAACCTCCACTTGCAGATAGTTTTAGTGATGTTTATGATGTCCCTCCTTCTAATCTCCGTGAACAGGAGCAATGGCTGAAGGAGATTGTAAGAAAACAACCACAAGAGACAAGGTTATTATCTGTGTTGGCTAAGGGTGGAGTAATGTTGGGCCCTTCGGTGCTTGGGCAAAACGAAGCATTTGCCAATGCAGTGTTTCCTCTAAGAAGTGTGATGGTGATTGAAACAATGGCAAACATTGGTCTCCTTTATTTTCTCTTCTTGGTAGGGGTGGAGATGGACCTAACAGTGATGCGTAGTGTTGGTAGAAAAGCTGTGGCTTCAGCAATAGCTGGCATGATTCTACCTTTTATCGTTGGAATTGCCTTCTCCTACCTTTTGGCAAAAAAAACTGACTCTGACATAAACCAAGGCACTTATATACTATTCCTTGGTGTTGCTCTCTCTGTCACTGCATTTCCTGTTCTTGCTAGGATCCTTGCAGAGCTTAAACTTGTCAACACAGAATTGGGGAGGCTTGCTCTTTCAGCTGCACTCATCAATGATGTGTGTGCTTGGGTTATGTTAGCTTTAGCCATTGCTTTAGCTGAGACTGAAATCACTACTTTGGCTTCTCTCTGGGTTCTAATATCAAGTGTAGTATTCGTGGCCATTTGTGCCTATGGTGTTAGACCAGCAGCTAAATGCCTAGTTAAGAAAACCCCAGAAGGTGAATCCTTCAGTGAGTTTTACATATCTCTTATTCTAGCTGGGGTCATGGTCTCAGGCTTCATCACTGATGCCATTGGGACTCATGCTGTTTTTGGAGCTTTTGTGTTTGGTTTGTCTATCCCAAATGGACCACTCAGTTTCACTCTTGTGGAGAAGCTTGAAGACTTTGTTTCAGGACTTTTGCTTCCTCTCTTTTTTGCCATTAGTGGGCTTAAAACTAACCTAGGGCTCATCCATGGCTCATACACCTGGGTAATTCTTATTATAGTCATTTTTTTGGCCTGCCTTGGTAAAGTTGTTGGAACCATTTTGGTTGCATTGTTTTATGAAATGCCAATACATGAAGGAGCTGCCCTTGGTTTACTCATGAACACAAAAGGCCTCGTTGAAATGGTCGTGCTTAATGTTGGGAAGGACCAGAAGGTTTTTGATGAGGAATCATTCGCAATTATGGTGGTTATAACAGTGATAATGACTGGAATTATTGTACCTGCCATATCAGTCATTTACAAGCCATCAAGAAATAGCATATGTTACAAAAGAAGAACAATTGAGATATCAAAATTAGATGCCGAGTTCAGAGTCCTATTTTGTGTCCACACCCCTCGAAACGTTCCAACGATGATCAACCTCCTTGAAGCCTCTAATCCAACAAAGAACTCTCCAATATGTGTCTATGTGCTCCATTTGGTGGAACTCAGTGGCCGAACATCAGCCATGCTCATTGTTCACAACACTGCAAAACAAGATGCCCCTGCCCTTAATCGAACAGAAGCTCAATCTGACCACATAATCAAAGCCTTTGAAAACTATGAGCAGCATGCTTCATTCGTCTCAGTCCAGCCCTTAACAGCAATTTCCCCTTACTCCACCATGCATGAAGACATTTGCAATTTGGCCTTGGACAAACGCGTGTCCCTCATAATCGTTCCTTTCCACAAACAACAAACGGTTGACGGTGGAATGGAAGCAACAAACATGGCATACAGATCCATCAACCAGAATGTGCTAGCAAATGCACCTTGCTCGGTCGGAATTCTAGTGGATAAAGGCTTAAGTGGCTCTAACCGTCTGGCGGGAAATCAAGTATCTCATCATGTAGCAGTGTTGTTCTTTGGAGGACCAGATGATAGAGAGGCATTGTGCTATGGATGGAGAATGGTGGAACATCACGGGATTAGCCTTACCGTAATGCGTTTTGTCCAAAGTGATCAAGTACAAGTAGAGCCATTGAGGCAACAACATGGTGGTATTGATTTGGATGAACCAAGGGTGCTGACAGTGCAAACAGATAGGGATATTCAGAAGCAGCATGATGAGAAGCTTATACATGAGTTTAGGATGAGGTGTGGGGATGATGATGCGGTTGATTATGTTGAGAAGGTGGTCAGCAATGGTGAGGACACAGTGGCAGCAATAAGAACAATGGATGACATTCATGACCTTTTCATAGTTGGGAGAGGTCAAGGGGTGATATCACCACTCACTGCAGGACTCACTGATTGGAGTGAGTGTCCTGAGATAGGGGCAATTGGGGATATGCTAGCATCTTCAGATTTTGCAGCCACTGCTTCAGTGTTGGTGCTGCAACAATATGTTGGGGATGGTTCACAATATGAAGGATTAGAAACACCATATGGTGAAGAATCCACACCACTACCACCAGGACATAAAATGTTCGGTTCAGAACACTAG 3699 0.4139 MRKFTTIFSHIKSTKMNFSVSLLHRSSPFCPNQPPHPNFKNLTWQNRDSLLLFPLLCSRHFASTTAQNPSTLNALQDHYQAIDFPGGAVQFIPEMRFISESPKERIPCYRVLDDNGQPILGHNFVQVSKEVAVKMYTDMVTLRSMDTIFYEAQRQGRISFYVTAIGEEAINVASAAALAMDDVVFPQYREAGVLLWRGFTLQEFANQLFSNIYDYGKGRQMPAHYGSKKHNYFTVASTIATQISHAVGAAYSLKMDKKDACAVTYFGDGGSSEGDFHAALNFAAVLEAPVIFICRNNGWAISTPISDQFRSDGVVVKGQAYGVRSIRVDGNDALAIYSAIQAARQMAITEERPILIEALTYRVGHHTTSDDSTKYRPANEIEWWRVARDPVVRFRKWIEKHGWWNDMAESELINNLRQQLLHTIQEAEGVEKPPLADSFSDVYDVPPSNLREQEQWLKEIVRKQPQETRLLSVLAKGGVMLGPSVLGQNEAFANAVFPLRSVMVIETMANIGLLYFLFLVGVEMDLTVMRSVGRKAVASAIAGMILPFIVGIAFSYLLAKKTDSDINQGTYILFLGVALSVTAFPVLARILAELKLVNTELGRLALSAALINDVCAWVMLALAIALAETEITTLASLWVLISSVVFVAICAYGVRPAAKCLVKKTPEGESFSEFYISLILAGVMVSGFITDAIGTHAVFGAFVFGLSIPNGPLSFTLVEKLEDFVSGLLLPLFFAISGLKTNLGLIHGSYTWVILIIVIFLACLGKVVGTILVALFYEMPIHEGAALGLLMNTKGLVEMVVLNVGKDQKVFDEESFAIMVVITVIMTGIIVPAISVIYKPSRNSICYKRRTIEISKLDAEFRVLFCVHTPRNVPTMINLLEASNPTKNSPICVYVLHLVELSGRTSAMLIVHNTAKQDAPALNRTEAQSDHIIKAFENYEQHASFVSVQPLTAISPYSTMHEDICNLALDKRVSLIIVPFHKQQTVDGGMEATNMAYRSINQNVLANAPCSVGILVDKGLSGSNRLAGNQVSHHVAVLFFGGPDDREALCYGWRMVEHHGISLTVMRFVQSDQVQVEPLRQQHGGIDLDEPRVLTVQTDRDIQKQHDEKLIHEFRMRCGDDDAVDYVEKVVSNGEDTVAAIRTMDDIHDLFIVGRGQGVISPLTAGLTDWSECPEIGAIGDMLASSDFAATASVLVLQQYVGDGSQYEGLETPYGEESTPLPPGHKMFGSEH 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02047 1232 Pfam Sodium/hydrogen exchanger family 478 832 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gma04g02047 1232 Gene3D - 77 469 - -
Gma04g02047 1232 CDD TPP_E1_PDC_ADC_BCADC 135 427 - -
Gma04g02047 1232 Gene3D - 882 1168 - -
Gma04g02047 1232 PANTHER CATION/H+ EXCHANGER 3 469 1212 - -
Gma04g02047 1232 PANTHER CATION/H + ANTIPORTER 469 1212 - -
Gma04g02047 1232 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 106 466 IPR029061 -
Gma04g02047 1232 MobiDBLite consensus disorder prediction 1208 1232 - -
Gma04g02047 1232 Pfam Dehydrogenase E1 component 138 433 IPR001017 GO:0016624
Gma04g02047 1232 Gene3D - 470 844 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02047 Gma-Chr4 50908442 50920831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02047 477 1213 Antiporter Super Family AT2G13620 67.615 0.0 1035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02047 - - gmx:100818927 1464.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02047 04 50908442 50920831 Gma06g01374 06 12906265 12911911 GST