Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02045 ATGAAGAAAGAAGGGTGTGAGGTTGAGGCAATAGGCATCAACTACAAGATTCGTACAAAGACAACAGAGCAACCTTTTAAAATCTTCACCAAACCTCCACAATCGAATAGGGAAGATGTTCATGAAGCAAAAGAGGAAGAAAGGCCATGCAGTGGAGTTAGGCATGTCCTCAAGGATGTGAATTGCATGGCCAAGCCATGGGAAATTTCGGCAATTGTTGGGCCAAGTGGAGCTGGAAAATCATCCCTTCTTGAGATCCTTGCTGGTAAAGCTAGTCCACAAAGTGGGTCTATCTTGGTGAATCAAGAACCTGTGGATAAAGCTAAGTTCAGAAAATTTTCAGGGTATGTTACACAAAAGGATACCTTGTTTCCCTTACTTACAGTTGAAGAAACCATTATGTTTATTGCAAAGTTAAGGCTAAATCTTCCTCAGGAGCAATTATGCTACAGGGTCAAGTCACTGATTCTAGAGCTTGGTCTTAGCCATGTCGCCAGGACTAGAATTGGAGATGAAAGGGTCCGAGGCATTTCCGGTGGTGAGAGACGCCGAGTTTCCATTGGTGTTGAAGTCATACATGATCCAAAAGTGCTGATTTTGGATGAACCAACTTCAGGGCTTGACAGTACTTCAGCTTTGCAAATAATTGAAATGCTTAAAGTCATGGCTGACTCTAGGGGAAGAACTATAATCCTAAGTATCCACCAACCCGGGTACAGAATAGTGAAGTTGTTCAACTCATTACTGTTATTGGCCAATGGCAATGTGTTGCACCATGGCACTGTGGATTTGCTGGGTGTGAATCTAAGGCTAATGGGTTTAGAGCTTCCTCTTCATGTTAATGTAGTTGAGTTTGCCATTGATTCCATTGAGACTATTCAGCAACAACAAAAATCAGAGCACGTTCAGCTAGAAGTGCCTCGGCGATTACCAGGGACAATGCAACAAAAGAAAGGTGGTGATCAAGGCGAGAGTAGAAGTGGTAAGTTTACTTTGCAACAGCTCTTTCAACAATCCAAGATAATTGACATAGAAATCATTAGTTCGGGAATGGATATCACACGTGATTTTGCTAATTCTGGATTGAGAGAAACTATGATTCTCACTCATAGGTTCTCCAAAAACATCCTTCGCACAACGGAACTCTTTGCTTGCAGGACAATTCAGATGCTGGTTTCTGGACTGGTTTTGGGCTCAGTCTTTTGTAATCTCAAGGATGGTCTAGTGGGAGCAGAAGAAAGAGTGGGTCTATTTGCTTTCATATTAACGTTTTTGTTATCAAGCACCACCGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAGACCTCCAGTGGAAGCTACAGAGTTTCATCCTATGCTATTGCCAATGGCCTAGTTTACTTGCCATTTCTACTCATACTAGCCATTTTATTCGCAATGCCTCTGTACTGGCTCATTGGTCTCAACAGGAATTTCACGGCAGTTTTGTACTTTTTGATGCTAATTTGGCTAGTTCTTTGCACCGCAAATTCGATTGTGGTATGTTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGGAATTCAATGATCGCAGGTGTCATCGGCTCGTTTCTCTTGTTCTCTGGCTACTTCATATCAAAACATGAAATTCCGAATTACTGGATTTTCATGCATTATATATCCCCATTTAAGTATCCCTTTGAAGGGTTCCTAATAAATGAGTTCTCCAACTCGAACAACTGCTTGGAGTACTTGTTTGGGGAATGTGTGGTGAGAGGAGAGGATGTACTTAAAGAAGCAAAGCTTGGAGGGGAGACTAGTAGATGGAAGAATGTTGGGGTGATGGTGTGCTTCATCTTTGTTTACAGGTTCATTTCTTATGTAATTCTTAGGTACAGATGCTCGCAAGGAGTCATCCTAAAAGTATGA 1923 0.4176 MKKEGCEVEAIGINYKIRTKTTEQPFKIFTKPPQSNREDVHEAKEEERPCSGVRHVLKDVNCMAKPWEISAIVGPSGAGKSSLLEILAGKASPQSGSILVNQEPVDKAKFRKFSGYVTQKDTLFPLLTVEETIMFIAKLRLNLPQEQLCYRVKSLILELGLSHVARTRIGDERVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIEMLKVMADSRGRTIILSIHQPGYRIVKLFNSLLLLANGNVLHHGTVDLLGVNLRLMGLELPLHVNVVEFAIDSIETIQQQQKSEHVQLEVPRRLPGTMQQKKGGDQGESRSGKFTLQQLFQQSKIIDIEIISSGMDITRDFANSGLRETMILTHRFSKNILRTTELFACRTIQMLVSGLVLGSVFCNLKDGLVGAEERVGLFAFILTFLLSSTTEALPIFLQEREILMKETSSGSYRVSSYAIANGLVYLPFLLILAILFAMPLYWLIGLNRNFTAVLYFLMLIWLVLCTANSIVVCFSALVPNFIVGNSMIAGVIGSFLLFSGYFISKHEIPNYWIFMHYISPFKYPFEGFLINEFSNSNNCLEYLFGECVVRGEDVLKEAKLGGETSRWKNVGVMVCFIFVYRFISYVILRYRCSQGVILKV 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02045 640 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524
Gma04g02045 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 264 IPR027417 -
Gma04g02045 640 Pfam ABC-2 type transporter 365 573 IPR013525 GO:0016020|GO:0140359
Gma04g02045 640 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 631 - -
Gma04g02045 640 SMART AAA_5 66 257 IPR003593 -
Gma04g02045 640 Gene3D - 43 307 IPR027417 -
Gma04g02045 640 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 631 - -
Gma04g02045 640 Pfam ABC transporter 57 205 IPR003439 GO:0005524
Gma04g02045 640 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 278 IPR003439 GO:0005524
Gma04g02045 640 Pfam ABC-2 type transporter 235 305 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02045 Gma-Chr4 50886641 50888563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02045 55 283 Calmodulin-binding Proteins AT2G36910 25.417 1.24e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02045 K05681 - gmx:121172640 1234.94