Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02031 ATGAAGTTAATCGGCGACGGTGCCGGTGGCCGGAAAGTTCTCGTCGGCGTTAAATTAGATCCTCGCAGCCGCGAATTGCTGACGTGGGCTCTCGTCAAGGTCGCCGAGCCCGGCGACCTCGTCATTGCTCTTCACGTCCTTGACACCATCACTGAGGGAACAGCGTCGCTGTTATCTCTCGTGAAGACATTCGATTCCGTTCTCGCCGTCTACGAAGGTTTCTGCAACCTGAAACAGGTTGGGCTGAGGCTTAAAGTGTGTCGCGGTGACTCGGTTCGGAAGGCCTTGGTGCAAGAGGCGAAGGCGTTTGGCGTTTCCACCGTGATTTTGGGAACTTCGAAATCTCATCACACTATTCGGTCTTCCGCGTGGGTTGCAAAGTACTGCGCGAAGAAATTGCCCAAGTGTATCTCTGTCTTCTCCGTTGATAATGGCAAAATCGCGTTCCGGAGAGAAGCTAATGGAAATTGCAGTGATCGAGAGAAATTGTGTGAAGGATCGAGTTTGTCGTCAAAATCATTGGTGGTTTATACAAATAAGAATATGAAGAGTTGTGGAAGTTGTGAATTGCAAGAGTGTTCTGGAAATGAGTTTGAGCAAGGGTTGTGTGGGGATGTTGAGAAGGAGAATCCGCTTGCTTTGGTTCCGTTTAAGAAGCTTGATGATGCTCCTTGTTTTTCGGTTTTGGTGGATAACTCGAAGCATAAACCTGGTTGGTCACTGCTTCGTCACGTGTTTCATCACAAGAAGCATACCCATAAGTCTTCTATGAAGAATACGTTTGTTTTTCAAAGGGCATTGCGGCAGCCGAATTGTCATTCTTCTGCTGTGGTCCATCCTGATCATAAACAAATTAGTATTGAGCAGATTGATGATTCCCCCCTTGATGGGGTGAGTGGTGCCATTGTACCATTTGAATCTACTACAACTACTATCTTTACTCTTCCCTCCATTTGCAGTGATTTGAGTAGCCTTCCCGAAGAATTGTTGGTATTACAAGAAAAGTACACGTCCTCGTGCCGATTATATAGTTTGCAGGAACTTGTATCTGCGACCTCCAACTTTGTATCTGAAAATTTGGTTGGCAAAGGTGGCTGTAGTTATGTTTACAGAGGATGTCTTCCAGATGGCAAGGAATTGGCTGTGAAAATTTTGAAGCCATCTGAAAACGTGATAAAGGAGTTTGTTCAGGAAATTGAGATCATTACAACTTTGCGCCACAAGAACATAATATCTATTTCTGGCTTTTGTTTAGAGGGCAACCATTTGCTACTAGTGTATGATTTTTTATCAAGGGGAAGCCTAGAAGAAAACCTTCATGGCAACAAGGTGGACTGTAGTGCATTTGGTTGGCAAGAAAGGTACAAGGTGGCCGTGGGTGTAGCTGAGGCATTGGATTATCTGCATAATGGCTGTGCTCAGGCTGTGATCCATAGGGATGTGAAATCTTCTAATATCCTTCTTGCAGATGATTTTGAGCCTCAGCTTTCAGATTTTGGACTGGCTAGTTGGGGTTCATCTTCTTCCCATATTACTTGTACTGATGTGGCCGGAACTTTTGGATACCTCGCACCTGAGTACTTTATGCATGGTAGAGTGACTGATAAAATTGACGTATATTCTTTTGGTGTTGTACTCCTCGAGCTTCTCTCAAATAGGAAGCCCATTAACAATGAATCTCCAAAGGGCCAGGAGAGCCTTGTTATGTGGGCAACACCAATTTTGGAAGGTGGGAAGTTTTCCCAGTTGCTTGATCCAAGCCTGGGCAGTGAATACAACACTTGCCAGATCAAGAGAATGATTTTGGCCGCTACTCTCTGCATTAGACGCATTCCTAGATTGCGGCCTCAAATCAACCTTATATTGAAACTTCTGCATGGTGATGAGGAGGTGATAAGATGGGCAGAACAAGAAGTTAATGCTCCACAGGAACTTGATGGATGTGATGAGGAACCAGTTCCAACTAACATTCAGTCCCACCTGAACCTTGCTTTACTAGACTTGGAGGATGATACGGTTTCTATCAGTAGCACTGAGCAGAGTGTCTCTCTGGAGGACTATTTGCAAGGAAGATGGAGTCGCTCTTCAAGTTTTGACTAA 2100 0.4495 MKLIGDGAGGRKVLVGVKLDPRSRELLTWALVKVAEPGDLVIALHVLDTITEGTASLLSLVKTFDSVLAVYEGFCNLKQVGLRLKVCRGDSVRKALVQEAKAFGVSTVILGTSKSHHTIRSSAWVAKYCAKKLPKCISVFSVDNGKIAFRREANGNCSDREKLCEGSSLSSKSLVVYTNKNMKSCGSCELQECSGNEFEQGLCGDVEKENPLALVPFKKLDDAPCFSVLVDNSKHKPGWSLLRHVFHHKKHTHKSSMKNTFVFQRALRQPNCHSSAVVHPDHKQISIEQIDDSPLDGVSGAIVPFESTTTTIFTLPSICSDLSSLPEELLVLQEKYTSSCRLYSLQELVSATSNFVSENLVGKGGCSYVYRGCLPDGKELAVKILKPSENVIKEFVQEIEIITTLRHKNIISISGFCLEGNHLLLVYDFLSRGSLEENLHGNKVDCSAFGWQERYKVAVGVAEALDYLHNGCAQAVIHRDVKSSNILLADDFEPQLSDFGLASWGSSSSHITCTDVAGTFGYLAPEYFMHGRVTDKIDVYSFGVVLLELLSNRKPINNESPKGQESLVMWATPILEGGKFSQLLDPSLGSEYNTCQIKRMILAATLCIRRIPRLRPQINLILKLLHGDEEVIRWAEQEVNAPQELDGCDEEPVPTNIQSHLNLALLDLEDDTVSISSTEQSVSLEDYLQGRWSRSSSFD 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02031 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Gma04g02031 699 SUPERFAMILY Protein kinase-like (PK-like) 336 625 IPR011009 -
Gma04g02031 699 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 7 693 - -
Gma04g02031 699 SMART serkin_6 355 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g02031 699 Pfam Universal stress protein family 11 134 IPR006016 -
Gma04g02031 699 Gene3D Phosphorylase Kinase; domain 1 324 429 - -
Gma04g02031 699 ProSiteProfiles Protein kinase domain profile. 355 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g02031 699 Gene3D Transferase(Phosphotransferase) domain 1 430 643 - -
Gma04g02031 699 Gene3D HUPs 10 142 IPR014729 -
Gma04g02031 699 Pfam Protein kinase domain 357 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g02031 699 PANTHER OS01G0253100 PROTEIN 7 693 IPR045271 GO:0004714|GO:0006468
Gma04g02031 699 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02031 Gma-Chr4 50738153 50741233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02031 338 621 Trihelix Transcription Factor Family AT1G68690 46.552 2.69e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma04g02031 Pkinase 3.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02031 - - gmx:100815722 1387.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02031 04 50738153 50741233 Gma04g02031 04 50738153 50741233 ECH
Gma04g02031 04 50738153 50741233 Gma06g01384 06 13034986 13038644 GST
Gma14g01435 14 30519909 30523787 Gma04g02031 04 50738153 50741233 PCT
Gma04g02031 04 50738153 50741233 Gma14g01435 14 30519909 30523787 PCT