Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02029 ATGTCTGGAAAGGCGAAGAGGAGAGACGACGACGATGCTTCCGACGCCGACTCCGAAGGCCACGCGCCGCCCATGAAGTCCCTCAAGAAGGATTCCGACGACGATCCCGACTCTGTTACCATTTGCGAAATTTCGAAGAACAGGAGGGTTGCCGTGAGGAACTGGAAAGGCAGCGTTATGGTTGACATTCGCGAGTTTTACGTCAAAGATGGCAAGCAATTGCCTGGCAGGAAAGGTATCTCGTTGACCATGGATCAGTGGAATGTGCTTCGTAATCATGTTGAAGAAATTGATAAGGCAGTTAATGAGAATTCTTAG 318 0.4969 MSGKAKRRDDDDASDADSEGHAPPMKSLKKDSDDDPDSVTICEISKNRRVAVRNWKGSVMVDIREFYVKDGKQLPGRKGISLTMDQWNVLRNHVEEIDKAVNENS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02029 105 Pfam Transcriptional Coactivator p15 (PC4) 42 93 IPR003173 GO:0003677|GO:0006355
Gma04g02029 105 SUPERFAMILY ssDNA-binding transcriptional regulator domain 41 102 IPR009044 GO:0003677|GO:0006355
Gma04g02029 105 MobiDBLite consensus disorder prediction 1 39 - -
Gma04g02029 105 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 12 104 IPR045125 GO:0003713|GO:0060261
Gma04g02029 105 Gene3D Transcriptional Coactivator Pc4; Chain A 29 105 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02029 Gma-Chr4 50718346 50720352 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Gma04g02029 PC4 1.7e-25 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02029 K25815 - gmx:100820368 193.356