Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01992 ATGAGGGCCCTTCTCCGGAATCACCTCTTGCATTTGTCATGTTCTCCAGCTCGCACGCTTCTGGTTCGGCTTCAAGCGTGCGAGCTGTCATCGTCATCTTCTTCTCCTCCTCGTGACTCCCGATACGTTAGGGTTTCGGTGTGGTGGGATTTGAGGAGCTGCCCGGTGCCTGATGACGTGGACCCTTTGAAGGTTGCGCCGGCAATCAGGCAGGCCGTGAGGGCCAACGGGATCAAAGGTCCAATTGCCATCAACGCTTTCGGGAATCTTAGCTCCCTCCCCGAGCACCACCTGGACACACTGGCTTCAAGCGGCATTCAAATCACCCACTTTCCTCAAGGTTGA 345 0.5623 MRALLRNHLLHLSCSPARTLLVRLQACELSSSSSSPPRDSRYVRVSVWWDLRSCPVPDDVDPLKVAPAIRQAVRANGIKGPIAINAFGNLSSLPEHHLDTLASSGIQITHFPQG 114
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01992 114 PANTHER EMB|CAB71880.1 9 113 - -
Gma04g01992 114 PANTHER LIMKAIN B LKAP 9 113 IPR024768 GO:0005777|GO:0010468|GO:1903231
Gma04g01992 114 CDD PIN_limkain_b1_N_like 44 114 - -
Gma04g01992 114 Pfam NYN domain 44 113 IPR021139 GO:0004540
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma04g01992 Gma-Chr4 50342078 50343244 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01992 45 110 C2H2 Transcription Factor Family AT3G62850 34.848 1.97e-13 63.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01992 - - gsj:114410030 221.09