Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01985 ATGGGTAGATCCCCTTGTTGCGAGAAAGAACACACCAACAAAGGAGCTTGGACCAAAGAAGAAGACGAACGCCTCATCAACTACATCAAGCTCCATGGTGAAGGCTGTTGGAGATCCCTCCCCAAAGCTGCTGGCTTGCTGagatgtggcaaaagttgccgactcagatggataaattacctcaggcctgatctcaagagaggcaacttcactgaagaggaagatgaactcatcataaatctccacagcttacttggaaacaaATGGTCTTTGATAGCTGCAAGGTTACCGGGAAGAACCGATAACGAAATCAAAAACTATTGGAACACTCACATCAAGAGAAAACTCTACAGCCGCGGAATCGACCCACAAACCCATCGTCCACTCAACGCCTCCGCCACTCCGGCAACCACCGCCACAGCCACCGCAGTTCCATCTGCTAACAGCAgcaagaagataaacaataacaacaacaacatcgacaatgatatcaacaacaacaacaatggttttcagttggtgtctaataGTGCTTATGCAAACACAAAGATTGGAACCAACTTGGTTGCTGCTGAAGATTCTAACAGCAGCAGCGGCGTTACAACAGAAGAATCCGTCCCTCATCATCAACTCAACTTGGACCTTTCCATTGGCCTTCCTTCTCAACCCCAAGGTTCTTCGTTGAACCCAGAAAAGTTGAAACCAGAACCGCAAGAGCATGATGATCAGAAGCCACAGGTTTTGTATAAGTGGTATGGGAACATCACTAGCCAGCAAGGTGTGTGCCTGTGTTACAATCTAGGGCTTCAGAGTAACCAAACTTGTTATTGCAAAACCATGGGTACTGCTACTACTACTACTGCCACTGATAGTAATCTATATAGATTTTACAGACCCATGAATATTTAG 909 0.3663 MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNASATPATTATATAVPSANSSKKINNNNNNIDNDINNNNNGFQLVSNSAYANTKIGTNLVAAEDSNSSSGVTTEESVPHHQLNLDLSIGLPSQPQGSSLNPEKLKPEPQEHDDQKPQVLYKWYGNITSQQGVCLCYNLGLQSNQTCYCKTMGTATTTTATDSNLYRFYRPMNI 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01985 302 Gene3D - 68 139 - -
Gma04g01985 302 MobiDBLite consensus disorder prediction 125 161 - -
Gma04g01985 302 CDD SANT 69 112 IPR001005 -
Gma04g01985 302 Gene3D - 14 66 - -
Gma04g01985 302 SMART sant 66 114 IPR001005 -
Gma04g01985 302 SMART sant 13 63 IPR001005 -
Gma04g01985 302 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gma04g01985 302 CDD SANT 16 61 IPR001005 -
Gma04g01985 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gma04g01985 302 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Gma04g01985 302 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gma04g01985 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gma04g01985 302 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gma04g01985 302 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Gma04g01985 302 MobiDBLite consensus disorder prediction 215 231 - -
Gma04g01985 302 MobiDBLite consensus disorder prediction 215 243 - -
Gma04g01985 302 PANTHER TRANSCRIPTION FACTOR MYB7 1 252 - -
Gma04g01985 302 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01985 Gma-Chr4 50285177 50286934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01985 1 234 MYB Transcription Factor Family AT4G38620 58.996 3.24e-89 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma04g01985 Myb_DNA-binding 4.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01985 K09422 - gmx:100808083 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01985 04 50285177 50286934 Gma06g01430 06 13591717 13593354 GST
Gma08g00050 08 439351 440727 Gma04g01985 04 50285177 50286934 PCT
Gma04g01985 04 50285177 50286934 Gma08g00050 08 439351 440727 PCT