Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01980 ATGGATCTGTGGGGTGCTCATCATCGACTTTTGTTCATTGGTCGGCATGAGGAAGATGGAACTCCTGATACTTCTATGGGAGAGGAATCAAACGATGAAGAAGAAAAAATAATTAAAACTGAACCCGTCTTTGTGCCTGAAATTAAGAAAAGGAAACGCCTTAGCCTTAGTCAGCTTAAAGAGGTGAAAGAGGAGTCACATGGGAAGCAAAGCAGTAGCAAGCCTAAGAGAAAGAAGCATGATAGTAGGGATAGATGGTCAGCTGAGAGGTATCAATTGGCTGAGCAAAACATGTGGGAGGTACTAAAGGCTGAAGGGGCGTCATTTGAAAACCCAATAACCCGACCTGCACTAAGATTGGCTGCCCGCAAACACATTGGAGATACTGGACTTTTAGATCACTTACTGAAGCACATTGATGGTAAAGTGGCACCTGGAGGGACTGAGAGATTCCGAAGATGGTTCAACACCAATGGAATCATGGAGTATTGGTTGGAGAGTGCTGACTTGGACAAGGTGCGCCAGGAGGCAGGGGTGCAGGACCCTTTCTGGATACCGCCATCTGCATATAGGGCAGCCGGTGCCCCTTCCCAAAATATTGATTCTTCTGATGAATTGAAACAGCTTAAAATAGAACTGACACAAATGAAGAAAGATATGCATGAGCTCATTGCCAAGAAGGAAGAGAAAAGTGATATTAACATGATGGAGGAGACACACAAGGAATTTGTGAAGTGGAAATTTATGACTGACCATCGCCTTACTGAAATCATGACTTCTTTGAAGGATGTTCAGGGAAAGTATGGTGAATTGATGATTTGGAAAACTACAGTTGCGCAACAACTTATGGAAATAACTAATAAATTGAATGATCTTCAAGCATCTAGGGAATGCACCACTTATAGTCCTCCTTCAGAAAGGTGGAAAGATTGGATAGAAAGCACCAACCTAGACAATATTCAGGAAGATGCATTTGCTACTTGGATTGGGAATCCAGAGCTACTTAATGTTCCACAAGAGGTTATACTTGAAGATCCCAACACGACCATGCCAACACAGCCACCCAGTGAAGAACTGACTAACAAGAAGAGCGATGTGCTGGAGTTAGTACCTGTAAAACTAGAAGATCAACCAAATGTAACCCCTGATTCTTCTACAACTGTTAATTCGAAGTCAGACCTTGACAACTCATTGATTATGTTTCAGGAGATGTTTATGGATTTATACAAATGGAAAGAGAAAATGGAACAGCAGCTGATGGAGGTATCGAATACTGTATATGTCAAACGATTCGGAATAGCAAGGGGAGCATGCATGGAAAAAACCCTTGGAAAACAATTCATATCTCTAACAACTAACCAAATTGGCAAATTCTAA 1377 0.4183 MDLWGAHHRLLFIGRHEEDGTPDTSMGEESNDEEEKIIKTEPVFVPEIKKRKRLSLSQLKEVKEESHGKQSSSKPKRKKHDSRDRWSAERYQLAEQNMWEVLKAEGASFENPITRPALRLAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTNGIMEYWLESADLDKVRQEAGVQDPFWIPPSAYRAAGAPSQNIDSSDELKQLKIELTQMKKDMHELIAKKEEKSDINMMEETHKEFVKWKFMTDHRLTEIMTSLKDVQGKYGELMIWKTTVAQQLMEITNKLNDLQASRECTTYSPPSERWKDWIESTNLDNIQEDAFATWIGNPELLNVPQEVILEDPNTTMPTQPPSEELTNKKSDVLELVPVKLEDQPNVTPDSSTTVNSKSDLDNSLIMFQEMFMDLYKWKEKMEQQLMEVSNTVYVKRFGIARGACMEKTLGKQFISLTTNQIGKF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01980 458 MobiDBLite consensus disorder prediction 55 87 - -
Gma04g01980 458 MobiDBLite consensus disorder prediction 55 71 - -
Gma04g01980 458 PANTHER PROTEIN DYAD 4 427 IPR044221 GO:0007131|GO:0051177|GO:0051321
Gma04g01980 458 PANTHER DYAD PROTEIN 4 427 - -
Gma04g01980 458 MobiDBLite consensus disorder prediction 15 42 - -
Gma04g01980 458 Coils Coil 199 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01980 Gma-Chr4 50202051 50205974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01980 85 166 PHD Transcription Factor Family AT5G22260 40.964 2.72e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01980 - - gmx:100806484 866.685