Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01952 ATGCGACACTACGTGCACTGCTACGCCTTACACTGTCTAGACGAGGAGGTCTCAAACGAGCTCCGAAGGGCGTTCAAGGAGAGAGGGGAGAACGTTGGGGCGTGGAGGCAAGCATGTTACAAGCCCCTTGTGGCCATTGCCGCGCGTCAAGGTTGGGACATTGATGCCATATTCAACGCACATCCTCGTCTTTCTATTTGGTATGTTCCGACAAAGCTTCGTCAGCTTTGTCACGCTGAGAGAAACAGTGTCTCGGCTTCAAGCTCCGTGTCTGCTGGCAGTGCTCACCTTCCCTTCTAA 300 0.5367 MRHYVHCYALHCLDEEVSNELRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSVSASSSVSAGSAHLPF 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01952 99 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 1 85 IPR035209 GO:0003677
Gma04g01952 99 PANTHER PROTEIN LEAFY 1 99 IPR002910 GO:0003677|GO:0006355
Gma04g01952 99 Gene3D Protein LEAFY 1 91 IPR038276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01952 Gma-Chr4 49985781 49986080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01952 1 83 Orphan Transcription Factor Family AT5G61850 89.157 7.85e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Gma04g01952 C_LFY_FLO 7.1e-53 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01952 - - gsj:114416001 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01952 04 49985781 49986080 Gma06g01455 06 13861246 13863940 GST