Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01951 ATGGAGGGAAGATCAATATCACATTCTTCTGAAAGAGAAGAGGAATATGGTTTGTTCCCAATATATTCTGAAAGGTCCCAGCAAGACATGTCAGCCATGGTTTCTGCTCTCACACAAGTCATTGGTGGCTCCAATAGTGATTCTCTTCATATGCATGAAGGCCTTTTAACTTCCTCACACAACAACACCTCAACCCAGAATACTAACGAACAATCCCAAGTACAACAACAAGAACAAGGGAGTGTAAGAAGAAGACACTACAGAGGAGTGAGGCAGCGTCCATGGGGAAAGTGGGCTGCAGAGATTCGCGATCCAAAGAAAGCAGCGAGGGTATGGCTTGGAACATTCGAAACTGCTGAAGCTGCAGCTCTTGCTTATGATGAAGCTGCACTCAGATTCAAAGGAAGCAAAGCAAAGCTCAATTTCCCTGAAAGGGTTCAAGGCACAGCTAGCGAATTTGGTTACCTCACAAATCAGCACATGTCATCAAGCAGCACTAATTCTAACCCTGTTGCTCCACACTTGACTACTCAAGAAACTTATTCACCAAGTCACTTTCAATATGCACAGCAACAATTCATGAGTGGTGAGAGTAACAGCTTCAGTAACCAAGATATGCTTCGTTTCTATGGGGGAGACAACATGTTTGTTTCTTCTCAGCAATCTGCATCTTCGTCTTCTTCTACTGCACTGTCTCAGCAGCAGCAAGAAGAGTTGCTGAAATTTTCGATGCAATTTGGAGGTTCTTCTCATTCTAATCATTCTGGGAATTGGAGGGGTGGACATTGA 789 0.4373 MEGRSISHSSEREEEYGLFPIYSERSQQDMSAMVSALTQVIGGSNSDSLHMHEGLLTSSHNNTSTQNTNEQSQVQQQEQGSVRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAALAYDEAALRFKGSKAKLNFPERVQGTASEFGYLTNQHMSSSSTNSNPVAPHLTTQETYSPSHFQYAQQQFMSGESNSFSNQDMLRFYGGDNMFVSSQQSASSSSSTALSQQQQEELLKFSMQFGGSSHSNHSGNWRGGH 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01951 262 Pfam AP2 domain 86 135 IPR001471 GO:0003700|GO:0006355
Gma04g01951 262 Gene3D AP2/ERF domain 85 145 IPR036955 GO:0003700|GO:0006355
Gma04g01951 262 MobiDBLite consensus disorder prediction 48 80 - -
Gma04g01951 262 SMART rav1_2 86 149 IPR001471 GO:0003700|GO:0006355
Gma04g01951 262 PANTHER DNA-BINDING DOMAIN 21 248 IPR044808 GO:0003700|GO:0009873
Gma04g01951 262 CDD AP2 86 144 IPR001471 GO:0003700|GO:0006355
Gma04g01951 262 SUPERFAMILY DNA-binding domain 86 144 IPR016177 GO:0003677
Gma04g01951 262 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 21 248 - -
Gma04g01951 262 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700|GO:0006355
Gma04g01951 262 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700|GO:0006355
Gma04g01951 262 MobiDBLite consensus disorder prediction 48 89 - -
Gma04g01951 262 ProSiteProfiles AP2/ERF domain profile. 86 143 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01951 Gma-Chr4 49974276 49976502 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01951 18 159 AP2-EREBP Transcription Factor Family AT5G61890 66.207 3.02e-61 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma04g01951 AP2 3.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01951 - - gmx:100799190 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01456 06 13872923 13875526 Gma04g01951 04 49974276 49976502 ECH
Gma08g02393 08 23649421 23651961 Gma04g01951 04 49974276 49976502 ECH
Gma04g01951 04 49974276 49976502 Gma04g01951 04 49974276 49976502 ECH