Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01937 ATGGCCAAAGAGCAGCAAAAGCAGGATCCCGCGGCAATCACCAACTCCTTCCAAAACCAAAACCAAACGCAGGAATTGCAGGGTAAAGGTGAAGTGGAAAAGGAGGAGGAGGCTGAGGCCCCTTTAGCTCTAAGCGTTACATACAAGGTTTTGCACATGTTGGGAGACATCACAGCAGGGCCTGCATCTATGTTCGCGCAATGGCTCCAATTAGTTCGTAAACGCACTTCCAACTGTCGCACTTCTGGCTTCCCTCACCGTTCTTCCAGCATGCCTTCTAGCCCGGGAGAATCTATTGAGGACACGAAGAATGATCAGCAAACAGAGATTAGTTTGTGGGAGAGGCTTGGTAAAGCTGAAATGTTGGACATTGAGTCGAGCTCATTTTCTTGGGACAGACTCTCTTCACTTCACCACACTGAGCACACTAGCAGCAATGAACATTCTGAGGATGAAATGAACCGTGTTCTTGAGGTAACAGTAAATTCTGGAGGGGTAGTCTTCTTTGCCTTTTTCAATGGTCTTGGGAACGACGATGCCTCTTCAAAAGAAGCAGCCGCTGTTATAAAGATATCGTCTTCAAGAATGGCAACACAATCCGAACGTCTTGGTTACGAATTTGCCAAATGGTTGGGAGTCCAAACTCCGCAGGCTAGAGTCATCCACAATACAAGTTTAGAGTGGACCCAGATAAAGGAAGCTACAGAAAAAGCAAGGGATGCTGCAAGTTCTACAACCGATGAAGTTGGTGAAATGACATGCACAGAACTTTTGGAAGCACTTGAACTTAGCCGATGTCTCATGTTTATGAGTTATGTGCACGGTTCACCCTTGCTTGAAAGCTCTAGAGCATTTGAATCACAGGAATTTGCAGAACGAACATCAGCAGCCCTTGGCAGGATAATGTTGCTGGACCTTGTCATCAGAAATGAAGATAGGCTCCCTTGCCGGCAGCTTAGATGGCGTGGGAACTCTGCAAATTTATTATTGGCTGAGAAGATTATCTCAAATACAGATACAGCAGGAGAAACTCCTGATTCTGCAATGAACACATATGGACAGCGAGTGAGTAGGACACCTCAAAAAGAAAAAAGGTCAACTTCAATGGATGGTAGATTGAATTCTCATAATTCTGGACTGGTATCACAATGCTCTGGTCTTTCTGACATGAGTTTTAAAAGTCAAATGTCATTAGAATTAATGCTTACTGACTTTATTGTGGCCATTGATTCTGGTGTTCCTCGTCGACCCCCTGCTGGAAAACGTGCAGATGACCAGGTTAATTATCCTAAGTTGGTCGAGTTACTACTCAATAGCTCAGAGTTTTCCTCTAACCTGTTACATGATATAACCGGAGGGAGACTAGGATTCCCTCATCCAGAAGACACAAATACAATCATTGATGTTCATACTACTGATGTAACATCAGTAGTTCATGCGTTCCGTAGTGGTTTTCGTGCTGCTCTTAGGGATCTGCAGGGATTCCACATATTCCTACTCACACTGCATCAAAAACTTGATAATTTGTTAAGATCATTTATGAATACTATAGGCAAAATATCATCAGGGGAGTCTGAAAAAGAGGATGCAGTGGTTCCTGACTCACCTTCACCCACTGTTGTGGGTAGTTGTCCCTCTCCATCTAGTAAGGAAAGGCTTTCTAATGATGTCCATCAAGATTGTAGTGATTCAGAATCTCAGAGAACCGCTCCAAGGACATCATCGTCTTCAGGCAATAGAGATTGTTGCGACTCTGCTTCTTCCATGTCAAGAGAAGGTTGGCATGGAAAACACTCTAAAGGAAGCGTGGAGTCACATCGTGGTCTCCGCTTGACAACTAAGCTCCGTGACTTACATAAATTTGCCAAGGTTGACTCAGAATCCAATAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAATGATGCTGTCAAGTTATGTTTGGAGCACAATTTTAACACAGGATTTTTCGAGGGTAGTGATAACAACACTGTTGTTGATGCATATGAACTGAAGGTCAGACTTGAGCATATCCTTGAGAGGATTGCCTTGATATCTGAGGCTGCAAATACAGAGAGACCATCTGCGGTTACAAATAGTCTGTTCATTGGTGGAGCACTGGCTGCAAGATCTACATACATACTGCAACGCTTGGGAATCACGCATATTTTATGTTTGTGTACAAATGAAATTGGCCAATCAGATTCTCAATTTCCTGATCTATTCACGTACAAAAATTTCTCTGTATGTGACGATGAAGATTCTAACATCAGCAGCATATTTGAAGAGGCCTGTGATTTTATAGATTATGTTGAACAAGCTGGTCACAGTGTTTTAGTTCATTGCTTCGAGGGGAAAAGCAGAAGTGCTACTTTGGTCCTTGCTTACCTGATGCTTAGAAAGAAATTCACTTTGTTAGAAGCATGGAATGCTCTAAAACGAGTTCATCGCCGATCTCAGCCTAACGATGGTTTTGCAAAGATCTTACTTGATCTGGACCAGAAACTGCACGGGAAGGTTTCAATGGAATGGCAGCAACGGAAACCAATGATGAAAAATTGCCCCATCTGTGGCAAGAATACTGGACTAAGCAGTAGCTCGCTTAAACTACATCTTCAGAAATCACACAAAAAGCTGTCATCAGGGAGCGTAGATAGTGCCATGACAATCGAGATCCAGAAGGCATTAACAACTTTGAAGATTAGCCATGGTGGGAGTGTCAGTCCCAAACCAAGGAAGTCTCATTCAACGATAGAAGCATAG 2763 0.4307 MAKEQQKQDPAAITNSFQNQNQTQELQGKGEVEKEEEAEAPLALSVTYKVLHMLGDITAGPASMFAQWLQLVRKRTSNCRTSGFPHRSSSMPSSPGESIEDTKNDQQTEISLWERLGKAEMLDIESSSFSWDRLSSLHHTEHTSSNEHSEDEMNRVLEVTVNSGGVVFFAFFNGLGNDDASSKEAAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNTSLEWTQIKEATEKARDAASSTTDEVGEMTCTELLEALELSRCLMFMSYVHGSPLLESSRAFESQEFAERTSAALGRIMLLDLVIRNEDRLPCRQLRWRGNSANLLLAEKIISNTDTAGETPDSAMNTYGQRVSRTPQKEKRSTSMDGRLNSHNSGLVSQCSGLSDMSFKSQMSLELMLTDFIVAIDSGVPRRPPAGKRADDQVNYPKLVELLLNSSEFSSNLLHDITGGRLGFPHPEDTNTIIDVHTTDVTSVVHAFRSGFRAALRDLQGFHIFLLTLHQKLDNLLRSFMNTIGKISSGESEKEDAVVPDSPSPTVVGSCPSPSSKERLSNDVHQDCSDSESQRTAPRTSSSSGNRDCCDSASSMSREGWHGKHSKGSVESHRGLRLTTKLRDLHKFAKVDSESNKELEQWNEMLKNDAVKLCLEHNFNTGFFEGSDNNTVVDAYELKVRLEHILERIALISEAANTERPSAVTNSLFIGGALAARSTYILQRLGITHILCLCTNEIGQSDSQFPDLFTYKNFSVCDDEDSNISSIFEEACDFIDYVEQAGHSVLVHCFEGKSRSATLVLAYLMLRKKFTLLEAWNALKRVHRRSQPNDGFAKILLDLDQKLHGKVSMEWQQRKPMMKNCPICGKNTGLSSSSLKLHLQKSHKKLSSGSVDSAMTIEIQKALTTLKISHGGSVSPKPRKSHSTIEA 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01937 920 MobiDBLite consensus disorder prediction 566 586 - -
Gma04g01937 920 MobiDBLite consensus disorder prediction 80 104 - -
Gma04g01937 920 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 20 919 - -
Gma04g01937 920 SMART dsp_5 693 835 IPR020422 GO:0006470|GO:0008138
Gma04g01937 920 MobiDBLite consensus disorder prediction 1 38 - -
Gma04g01937 920 MobiDBLite consensus disorder prediction 8 27 - -
Gma04g01937 920 SUPERFAMILY Protein kinase-like (PK-like) 67 426 IPR011009 -
Gma04g01937 920 MobiDBLite consensus disorder prediction 339 377 - -
Gma04g01937 920 Pfam Actin-fragmin kinase, catalytic 109 387 IPR015275 -
Gma04g01937 920 MobiDBLite consensus disorder prediction 591 608 - -
Gma04g01937 920 ProSiteProfiles Dual specificity protein phosphatase domain profile. 693 838 IPR020422 GO:0006470|GO:0008138
Gma04g01937 920 MobiDBLite consensus disorder prediction 339 357 - -
Gma04g01937 920 MobiDBLite consensus disorder prediction 80 101 - -
Gma04g01937 920 Gene3D Protein tyrosine phosphatase superfamily 676 848 IPR029021 -
Gma04g01937 920 CDD DSP 694 831 - -
Gma04g01937 920 Pfam Dual specificity phosphatase, catalytic domain 705 833 IPR000340 GO:0008138|GO:0016311
Gma04g01937 920 Gene3D - 277 413 IPR036940 GO:0016301
Gma04g01937 920 ProSitePatterns Tyrosine specific protein phosphatases active site. 780 790 IPR016130 GO:0016311|GO:0016791
Gma04g01937 920 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 20 919 IPR035010 GO:0004721|GO:0009737|GO:0043622
Gma04g01937 920 MobiDBLite consensus disorder prediction 522 608 - -
Gma04g01937 920 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 693 838 IPR029021 -
Gma04g01937 920 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 762 814 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01937 Gma-Chr4 49771300 49777946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01937 36 904 Protein tyrosine phosphatase (PTP) family AT5G23720 63.535 0.0 1082
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01937 K14165 - gmx:102661225 1726.45