Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01930 ATGAAAGATTCAACAGAAACAGATGCTATCAGCGATTCCCTTGAGCTTCTGAGTACCTTTCTGGACTCGGAGCTCCCAAGCGTGAGAAACTTCAAAGGGAAATGGTCACTCGCCCGAGTCAAACTCACCCAACTCCAAACCCACCTCACCGATTTCTCCGCCGAGTTCCCCAACGCCTCCACCACAAACCCCCTCTCCCTCCACCTCCTCCACTCAATCTTCAAAACCCTAAACGACGCCGTTTCGCTCTCCCGCTCATGCCAACCCCAAACCCTCCCAAACGGAAAACTCAAAACCCAAAGCGACCTCGACTCCCTCCTCGCCACCCTCGACCGCCACGTCAGCGACTGCGACATTCTCTTCCGCAGCGGCCTCCTCCTCGAAAACGACGccgtttccgtttccgtttccgtttcATCGAAACGCGAAGCCATCCGCTCCGAATCACGTAACCTAATAACCCGTCTTCAAATCGGGTCGCCCGAGTCCAAAGCCTCCGCCATGGACTCCTTACTGGGCCTTCTCCAAGAAGACGACAAAAACGTGACCATCGCGGTGGCCCAGGGAGTCGTTCCCGTGCTCGTGCGCCTACTCGATTCCCCCCCCTCCGACACAAAAGAGAAAACCGTCGCTGCCATCTCAAAAGTCTCCACCGTGGAAAGCGCGAAGAGCGTGCTTCTCGCGGAGGGCTTGCTCCTTCTCAACCACTTGCTTAGGGTTTTAGATTCCGGAAGCGGGTTCGCTATTGAGAAAGCATGCATTGCGCTTCGGGCGCTGAGTTTGACGAAGGAGAACGCTAGGGCGATTGGCTCTCGCGGCGGAATCTCGTCGCTTTTGGAGATTTGCCAGGCTGGCACCCCTGGTGCACAGGCTTCTGCCGCCGCCGTGCTGCGCAACCTCGCCGCGTTTGAGGAAATTAGAGATAATTTTGTTGAGGAGAACGCGGTGGTGGTTCTGATTGCGTTGGCCTCCTCCGGAACCGCGGTGGCGCGTGAAAACGCGGTAGGGTGTTTGTCTAATTTGATTAATTCGGATTCTTCGTCGGAGGAGACCGAGGGTTTGTCGAATTTGAGGATTACGGTGGTGAAAGAAGGTGGTGTTGAGTGTTTGAAGAATTACTGGGATTCAGGGACTCAAATTCAGAGTCTTGAAGTTGCGGTTGTAATGTTGAGACATTTGGCTGAAAGTGGTCCAATTGGTGAAGTTCTTGTTGGTGAAGGTTTTGTTCAGAGGCTTGTTGGGGTGCTGAATCGTGAGGTTTTGGCGGTTCGGATTGCGGCGGCGAGGGCGGTTTACGCGTTGGGATTGAACAGTGGGAGGGCGAGGAAGGAGATGGGGGAATTGGGGTGCGTTTTAGGTTTGATTAAAATGTTAGATGGGAAGGGTGTGGAGGAAAAAGAAGCTTCTGCAATGGCATTGTCGGTGCTGCTGATGCACCCGGCGAATCGGAGGGTTTTCCGCAAGGACGAAAGAGGGGTTGTGAGTGCAGTTCATCTCTTGAACCCTTCGTTGCAGGGGTTGGATAAGAAGTACCCTGTTTCGTTGCTCGCTTTGCTTGTTCATTCCAAGAGTTGCAGGAAGCAAATGGTGGCTGCTGGAGCCTGTGTATATACGCAGAAGCTTGTTGAGATGGATGTTCCCGGGTCGAAGAAATTCTTGGAGAGCCTCGGGCGTGGATTGATTCTGTAA 1689 0.5287 MKDSTETDAISDSLELLSTFLDSELPSVRNFKGKWSLARVKLTQLQTHLTDFSAEFPNASTTNPLSLHLLHSIFKTLNDAVSLSRSCQPQTLPNGKLKTQSDLDSLLATLDRHVSDCDILFRSGLLLENDAVSVSVSVSSKREAIRSESRNLITRLQIGSPESKASAMDSLLGLLQEDDKNVTIAVAQGVVPVLVRLLDSPPSDTKEKTVAAISKVSTVESAKSVLLAEGLLLLNHLLRVLDSGSGFAIEKACIALRALSLTKENARAIGSRGGISSLLEICQAGTPGAQASAAAVLRNLAAFEEIRDNFVEENAVVVLIALASSGTAVARENAVGCLSNLINSDSSSEETEGLSNLRITVVKEGGVECLKNYWDSGTQIQSLEVAVVMLRHLAESGPIGEVLVGEGFVQRLVGVLNREVLAVRIAAARAVYALGLNSGRARKEMGELGCVLGLIKMLDGKGVEEKEASAMALSVLLMHPANRRVFRKDERGVVSAVHLLNPSLQGLDKKYPVSLLALLVHSKSCRKQMVAAGACVYTQKLVEMDVPGSKKFLESLGRGLIL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01930 562 Gene3D - 131 359 IPR011989 -
Gma04g01930 562 SMART arm_5 396 436 IPR000225 GO:0005515
Gma04g01930 562 SMART arm_5 262 302 IPR000225 GO:0005515
Gma04g01930 562 SMART arm_5 303 343 IPR000225 GO:0005515
Gma04g01930 562 SMART arm_5 178 218 IPR000225 GO:0005515
Gma04g01930 562 SMART arm_5 437 478 IPR000225 GO:0005515
Gma04g01930 562 Gene3D - 360 545 IPR011989 -
Gma04g01930 562 Pfam Armadillo/beta-catenin-like repeat 179 214 IPR000225 GO:0005515
Gma04g01930 562 PANTHER BNAC03G16340D PROTEIN 15 560 - -
Gma04g01930 562 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 15 560 - -
Gma04g01930 562 SUPERFAMILY ARM repeat 151 506 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01930 Gma-Chr4 49664808 49667394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01930 150 327 U-box Gene Family AT1G23030 29.775 4.08e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01930 - - gmx:100794077 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01476 06 14186092 14188164 Gma04g01930 04 49664808 49667394 ECH
Gma04g01930 04 49664808 49667394 Gma04g01930 04 49664808 49667394 ECH