Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01902 ATGGAATTTAATAAAGATGGTGCCTTAAGGGCTAAAAAACTTGCTGAGAAGATGCTTTTACAGAGGGAATTTGGAGGGGCAAGAATACTCGCAAAGAAGGCTCTAGAATTATATCCCAATCTTGATGGTCTTCCTCAATTTCTAGCAACTATTGAGGTGTATATCTCTTCCGAAGATAGAGTTAATGGAGAACTTGATTGGTACAGGATCCTTGGTGTGCAACCTTTGGCCGATGAAGAAACTATTCGAAGACAATACAGGAAACTGGCTCTTACTCTGCATCCTGATAAAAATAGATCCGTAGGTGCAGATGGGGCATTTAGCCTTATCTCACAGGCTTGGAGTTTATTATCTGATAAAGCCAAGAGAATCACCTATGACCAAAAGTGCAATTTATGGCGTAATGGAAATCCTGGTGGGAAACCTTCTATGCCAGCCAGTCAGAATGGTTCGCATAGTAACATCTTTAATCCTGTGTTGTTGAAACCCACATTTTGGACCTTTTGCAGTTTCTGCAAGACAAATTTTGAGTACCATAATGTTTATGTTAACAGCAATCTTGTCTGTACCTGCTGTCATAAGCCATTTTTGGCTTCCGAGACATTGCCTCCACCTGGATACAGAAATGTTTCATCCACTCAGATGAAGCAACATAACTTCAACTCAATGAGAATGGAAAGAAATTATCATTTTTCAGGAAGGACGCCTATGTCTGCTGTCAATTCATCACTTGGGTCAGGTCCTTTCTCTATGCCTGATGGTATTTCCCGTGTTCCAGCATCAGCTTCTAGTGCTGCAGAAGCTCCTGGTGTTTTTAGGATGTCATCTGAGAATTTGAAGAGAAGGCATGAAGATTCAGCAACTTTCTTGAGGGAGGATGCCCATTTTGGGAATGCTCATGCTGTTGATAGAACTGGTGCTGGTTCAGCTTTTCAGTCCTCTCGTTTTGGTTCAAATTCTATTATGAAAGGAGATAGGCCAAGGAAAAACAGGCCCACTGATGAACATAAAGTTGGTAGTGATAGAAGAGATATGGAAAACAAAACAGCATCTCAAAATGAAGGAATAAACTTGGCAAATGAATTTGGATCAGGAAGGGTTAATGCTGCAGGAAATCACAAACGCACTGGTGTTAGGGACAGATCACAGCATCAAATAAAGAACATATTGGTGGAAAAGGCTCGGAAGGAGATTGTTAAAAAGCTTGATGAATGGAAAGCTTCTTCTGCATCAAATAATTTAGACAAGTCAAAGAATACTGACACAGAAATCAGAGAGAAGGGCAAAGAAAGGGAAGGAAATGTTGTAAAACCTGGTGCACAAGTTGTTGATTCTGAGACCGTCAACAAGAAGTGTTTCTCTGCTGATCTAGAGCCAGAGCTGCCTGGTTCTCTCTCAATGAATGTTCCAGACCCAGATTTCCATGATTTTGATGGAGACCGTACTGAAAATGCTTTTGGTGAGAACCAGGTATGGGCTGCATATGATAATGATGATGGCATGCCGCGTTACTATTGCTTAATCCATGATGTAATCTCAAAGAATCCTTTGAATATGAGGATTAGCTGGTTGAATGCCAAAAGCAATGATGAATTGGCCCCAATAGAGTGGGTCAGTTCTGGCTTTCCCAAGACCAGCGGAGATTTCAGAATAGGAAAGCGTGTATCCTATAGCACTCTTAATTCCTTCTCCCACAGGGTTAAGTGGACAAAAGGTTCAAGAGGGGTTGTCCATATATATCCGAAGAAAGGTGACGTATGGGCTTTGTATCGGAACTGGTCCCTTGACTGGAATAAATTTACTGAAGATGAAATCATACAGAAATATGACATGGTGGAGGTGCTTGAAGACTACTGTGAAGAGAAAGGTGTGAATATTGCCCCACTTGTTAAGGTTTCAGGTTTCAAGACAGTATTCCGCCAGAATGCCGATCCAAGAAAGGTCAAGAATATTTCAAAGGCGGAGATGTTTCGTTTCTCCCACCAGGTACCTTCACACTGGCTTACTGGTGTAGAGGGTCACAATGCTCCGAAAGGTTGCTTGGAGCTTGATCCTGCTGCTACTCCGATGGAACTTCTTCAGGTGTTAGCCGAGGATCTGGAGCAAGTAATTCTAATGACAACTGAAAAATCTGTGGAAGATGAATTGAAGCACAAAGAGAATTCCAGGGAGGAGGGTTTGATCAAGATGtgccagacaactaaggacgaaggttctgatgaagggttgggagagaagaaaaggaa 2246 0.4078 MEFNKDGALRAKKLAEKMLLQREFGGARILAKKALELYPNLDGLPQFLATIEVYISSEDRVNGELDWYRILGVQPLADEETIRRQYRKLALTLHPDKNRSVGADGAFSLISQAWSLLSDKAKRITYDQKCNLWRNGNPGGKPSMPASQNGSHSNIFNPVLLKPTFWTFCSFCKTNFEYHNVYVNSNLVCTCCHKPFLASETLPPPGYRNVSSTQMKQHNFNSMRMERNYHFSGRTPMSAVNSSLGSGPFSMPDGISRVPASASSAAEAPGVFRMSSENLKRRHEDSATFLREDAHFGNAHAVDRTGAGSAFQSSRFGSNSIMKGDRPRKNRPTDEHKVGSDRRDMENKTASQNEGINLANEFGSGRVNAAGNHKRTGVRDRSQHQIKNILVEKARKEIVKKLDEWKASSASNNLDKSKNTDTEIREKGKEREGNVVKPGAQVVDSETVNKKCFSADLEPELPGSLSMNVPDPDFHDFDGDRTENAFGENQVWAAYDNDDGMPRYYCLIHDVISKNPLNMRISWLNAKSNDELAPIEWVSSGFPKTSGDFRIGKRVSYSTLNSFSHRVKWTKGSRGVVHIYPKKGDVWALYRNWSLDWNKFTEDEIIQKYDMVEVLEDYCEEKGVNIAPLVKVSGFKTVFRQNADPRKVKNISKAEMFRFSHQVPSHWLTGVEGHNAPKGCLELDPAATPMELLQVLAEDLEQVILMTTEKSVEDELKHKENSREEGLIKMCQTTKDEGSDEGLGEKKR 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01902 748 SUPERFAMILY Chaperone J-domain 64 152 IPR036869 -
Gma04g01902 748 MobiDBLite consensus disorder prediction 715 748 - -
Gma04g01902 748 MobiDBLite consensus disorder prediction 305 353 - -
Gma04g01902 748 PRINTS DnaJ domain signature 86 101 IPR001623 -
Gma04g01902 748 PRINTS DnaJ domain signature 68 86 IPR001623 -
Gma04g01902 748 PRINTS DnaJ domain signature 122 141 IPR001623 -
Gma04g01902 748 PRINTS DnaJ domain signature 102 122 IPR001623 -
Gma04g01902 748 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Gma04g01902 748 PANTHER HEAT SHOCK PROTEIN-LIKE 1 718 - -
Gma04g01902 748 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Gma04g01902 748 Gene3D DnaJ domain 64 168 IPR036869 -
Gma04g01902 748 MobiDBLite consensus disorder prediction 418 433 - -
Gma04g01902 748 CDD DnaJ 66 119 IPR001623 -
Gma04g01902 748 Pfam DnaJ domain 66 127 IPR001623 -
Gma04g01902 748 SMART dnaj_3 65 122 IPR001623 -
Gma04g01902 748 Pfam Domain of unknown function (DUF3444) 466 671 IPR024593 -
Gma04g01902 748 MobiDBLite consensus disorder prediction 322 349 - -
Gma04g01902 748 MobiDBLite consensus disorder prediction 410 433 - -
Gma04g01902 748 PANTHER BNAC03G44070D PROTEIN 1 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01902 Gma-Chr4 49296685 49298930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01902 4 204 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.081 4.79e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01902 - - gmx:100788095 1519.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01902 04 49296685 49298930 Gma06g01508 06 14512975 14515356 GST