Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01901 ATGGAGAACAACCAGCAACAAGGCGCTCAAGCCCAATCGGGACCGTACCCCGGCGGCGCCggtggaagtgcaggtgcaggtgcaggtgcaggtgcaggCGCGGCCCCGTTCCAGCACCTGCTCCAGCAGCAGCAGCAGCAGCTGCAGATGTTCTGGTCGTACCAGCGGCAAGAGATCGAGCACGTGAACGACTTCAAGAACCACCAGCTCCCCTTGGCCCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTCCGCATGATCTCCGCCGAGGCCCCCATCCTCTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACCATCCGCTCCTGGCTCCACGCCGACGAGAACAAGCGCCGCACCCTCCAGAAGAACGACATCGCCGCCGCCATCACTCGCACCGACATTTTCGACTTCCTCGTCGACATCGTCCCCCGCGACGAGATCAAGGACGACGCCGCGCTCGTCGGGGCAACGGCCAGTGGGGTGCCTTACTACTACCCGCCCATTGGCCAGCCTGCCGGGATGATGATTGGCCGCCCCGCCGTCGATCCCGCCACCGGAGTTTATGTCCAGCCGCCCTCCCAGGCCTGGCAGTCCGTCTGGCAGTCCGCCGCCGAGGACACGCCCTACGGCACCGGTGCCCAGGGGAACCTTGATGGCCAGAGCTGA 675 0.6163 MENNQQQGAQAQSGPYPGGAGGSAGAGAGAGAGAAPFQHLLQQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHADENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDDAALVGATASGVPYYYPPIGQPAGMMIGRPAVDPATGVYVQPPSQAWQSVWQSAAEDTPYGTGAQGNLDGQS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01901 224 SUPERFAMILY Histone-fold 42 141 IPR009072 GO:0046982
Gma04g01901 224 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 1 224 - -
Gma04g01901 224 MobiDBLite consensus disorder prediction 203 224 - -
Gma04g01901 224 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 224 - -
Gma04g01901 224 MobiDBLite consensus disorder prediction 1 28 - -
Gma04g01901 224 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 69 132 IPR003958 -
Gma04g01901 224 Gene3D Histone, subunit A 35 147 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01901 Gma-Chr4 49282398 49286411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01901 30 223 CCAAT-HAP5 Transcription Factor Family AT3G48590 78.037 1.04e-103 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Gma04g01901 CBFD_NFYB_HMF 2.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01901 - - gmx:100783316 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01901 04 49282398 49286411 Gma06g01509 06 14526026 14530636 GST