Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01883 ATGGGGTTTCATGACTTGGTTTTGCTATTCTGTTCAGCTTGGTGTGTGTTTTATGTGGGTAGTTGCAGTGCTCAGTTGCAATCTTCTCAGACCCAAGTGCTTCTCCAGCTGAAAAAGCACTTGGAGTACCCAAAACAGTTGGAAATATGGAGAGATCGTTGGACAGATCTTTGCTCTATTTCTTCTTCTGGGCAAGTGAATGCCACATGCAAGGACAATTTTGTCACTGAGCTCACAATCTTGGGTGATAAACCAACAAAGGGTAGAGATTTTGATGGGTTTGCCAATCCAAATCAAACACTATCAGAGAGCTTCTCCATGGAGTCTTTTGTGGCTACTCTGGCAAGGTTAACCAGCCTTAGAGTCCTTAGTCTTGTCTCTTTGGGCATGTGGGGACCACTCCCTGATAGAATTCACAGACTCTATGCACTTGAACATTTGGACTTGAGTTCCAATTATCTTTATGGATCAATCCCTCCAAAGATTTGCACAATGGTGAACCTTCAAACTCTTAGATTGGGTGATAACTTCTTTAATGGTACCATCTCAAGCTTGTTCAGTTCATCAAACAATCTCACAGTTCTTAGTTTGAAGAGTAACAGGTTGAAGGGTCCATTTCCACTTTCAATCCCTAGTGTCATCACCCTAACTGAAATTGACATGTCATGCAATCAAATATCAGGGAGATTGCAAGATTTAACTGATTTGAGTAGCTTGGAACAACTAGATTTAAGGGAAAACAGGTTAGACTCTAAACTACCTGCAATGCCAAAAGGGTTGATAAGTCTTTTCCTCAGCAGAAACTCTTTCTCAGGTGAAATTCCCGAGCACTATGGTCAACTAGATAGGCTTCAGAAGCTTGATGTTTCCTTCAATTCACTCACAGGCACTGCTCCTGCTGAACTTTTTTCTTTGCCTAACATTAGTTACTTGAATTTGGCATCCAACATGTTGAATGGACCACTCCATAATCACCTAAGATGTAGCAGTCAACTCAGATTTGTTGACATATCATACAATAGATTGGTGGGGGACTTGCCTTCCTCACTCAGCACTAAATCAGAAAATAGAGTTGTTAAGAGTGATGGAAACTGTTTATCTGGGAGTGTGCAGCATCAGCATGCAGTATCCTACTGCACAGAAATTTATGCGAAGAAGAAATCATACAGAGTTGGAATTTTTGTTGGTCTCATTGTGGGAATTCTTGCAATCATTGTGGTTTTGGCTTTGACCATTGTTATAACTTGTAAAAGGTATTTCCCTTGGGGGGTGTCAGAGCAGCACCTATTGCATAAAACAGTTCAAGATAGCAGCTATGCAGCAGGAATCTCCTCTGAGCTTCTCACAAATGCAAGGTATGTTTCTGAAGCCGCAAAGTTAGGCAGAGAGGACCTCCCCACATGTCGGTCATATTCCTTGGAAGAGCTAAAGGAAGCCACAAATAACTTTGACAACTCCACTTTTATGGGTGAGAATATATATGGGAAGCTTTACAGAGGAAAATTGGAGAGTGGAATACAGGTTGTAATAAGGTCCCTGCCTTTGTCAAAAAAGTATTCAATTAGGAATTTCAAACTGAGGTTGGATTTGCTTGCAAAGCTGCGTCACCCTCATTTGGTATCCCTCTTAGGGCACTGCACGGATGGTGCTGTAGGAGAGAATAATGAGGCTAATGTCTTCCTCATTTATGAATACGTGTCAAATGGGACTTTTCAGACTTATCTCTCTGGAGATAGTCCAGGCAAGGTTTTCAATTGGTCTGAGCGATTGTCAGTACTAATTAACATTGCTAAGGCTGTCCACTTCCTACACACTGGCATGATACCTGGTTTCTTCAAAAACCGACTTAAGACCAACAATATCTTGCTGAATGAGAATTGGATGGCAAAGTTGAGTGACTATGGATTGTCCGTTATATCAGAAGAAACTGATGCAAGTGGGGTTTATTTGTGTCATGATTTTTTCAACATGTGTAATTTCAGGCAAATGAAAATGTTAGAGGATGATGTTTATAGCTTTGGATTCATACTACTCGAGGCACTTGTTGGACCTTCATTATCAGCTAAAAGTGAAGTAAATGTGCTGAATGTAATGGCATCTTTCAATAGTCAAGATGGTTGGAAACAGATTGTGGACCCAGTTGTGCAAGCTACATGCTCTAAAGAGTCTCTATTAGTTGTTATTTCCATAACAAACAAATGTATATCTTCTGAGTCATGGAGCCGACCATCCATTGAGGATGTCCTTTGGAACCTTCAGTATGCATCTCAAATTCAGGCAACACCTGATGGGGATCAGAGAATTTGA 2307 0.4083 MGFHDLVLLFCSAWCVFYVGSCSAQLQSSQTQVLLQLKKHLEYPKQLEIWRDRWTDLCSISSSGQVNATCKDNFVTELTILGDKPTKGRDFDGFANPNQTLSESFSMESFVATLARLTSLRVLSLVSLGMWGPLPDRIHRLYALEHLDLSSNYLYGSIPPKICTMVNLQTLRLGDNFFNGTISSLFSSSNNLTVLSLKSNRLKGPFPLSIPSVITLTEIDMSCNQISGRLQDLTDLSSLEQLDLRENRLDSKLPAMPKGLISLFLSRNSFSGEIPEHYGQLDRLQKLDVSFNSLTGTAPAELFSLPNISYLNLASNMLNGPLHNHLRCSSQLRFVDISYNRLVGDLPSSLSTKSENRVVKSDGNCLSGSVQHQHAVSYCTEIYAKKKSYRVGIFVGLIVGILAIIVVLALTIVITCKRYFPWGVSEQHLLHKTVQDSSYAAGISSELLTNARYVSEAAKLGREDLPTCRSYSLEELKEATNNFDNSTFMGENIYGKLYRGKLESGIQVVIRSLPLSKKYSIRNFKLRLDLLAKLRHPHLVSLLGHCTDGAVGENNEANVFLIYEYVSNGTFQTYLSGDSPGKVFNWSERLSVLINIAKAVHFLHTGMIPGFFKNRLKTNNILLNENWMAKLSDYGLSVISEETDASGVYLCHDFFNMCNFRQMKMLEDDVYSFGFILLEALVGPSLSAKSEVNVLNVMASFNSQDGWKQIVDPVVQATCSKESLLVVISITNKCISSESWSRPSIEDVLWNLQYASQIQATPDGDQRI 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01883 768 PANTHER BNAA09G06560D PROTEIN 4 767 - -
Gma04g01883 768 Gene3D Ribonuclease Inhibitor 27 259 IPR032675 -
Gma04g01883 768 SUPERFAMILY Protein kinase-like (PK-like) 466 753 IPR011009 -
Gma04g01883 768 ProSiteProfiles Protein kinase domain profile. 483 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01883 768 PANTHER OS07G0166700 PROTEIN 4 767 IPR045272 GO:0004714|GO:0006468
Gma04g01883 768 Pfam Leucine rich repeat 283 342 IPR001611 GO:0005515
Gma04g01883 768 SMART LRR_typ_2 236 263 IPR003591 -
Gma04g01883 768 SMART LRR_typ_2 141 165 IPR003591 -
Gma04g01883 768 SMART LRR_typ_2 281 305 IPR003591 -
Gma04g01883 768 Gene3D Ribonuclease Inhibitor 260 392 IPR032675 -
Gma04g01883 768 Gene3D Transferase(Phosphotransferase) domain 1 566 765 - -
Gma04g01883 768 Pfam Protein tyrosine and serine/threonine kinase 489 749 IPR001245 GO:0004672|GO:0006468
Gma04g01883 768 Gene3D Phosphorylase Kinase; domain 1 448 565 - -
Gma04g01883 768 SUPERFAMILY L domain-like 31 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01883 Gma-Chr4 49073103 49077315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01883 6 700 Miscellaneous Gene Families AT5G14210 50.283 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Gma04g01883 PK_Tyr_Ser-Thr 7.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01883 - - gmx:100802978 1315.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01528 06 14719542 14725195 Gma04g01883 04 49073103 49077315 ECH
Gma04g01883 04 49073103 49077315 Gma04g01883 04 49073103 49077315 ECH
Gma04g01883 04 49073103 49077315 Gma06g01528 06 14719542 14725195 GST