Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01882 ATGGCTACCCAAACCCAAACACAGTCACATCCAAACACCACCATCGACCCAAACAGCGGCTTCTGTTCCCATTCCAGAACCTTCCACACCCTCCGTCCAAACGTCCCTCTCCCTCCGCCCTCCCACCCCCTCTCCCTCACCGACTACGCCTTCTCCCTCCTCCCCGCCGCCGCCACCACCACCTCCGCCCTCATCGaCGCCGCCACCGACCGCCACCTCTCTTACTCTCTCCTCCTCCGCCAAGtccaatccctcgcctcctctctccaatccctcacccctctctccaaAGGCCACGTGGCACTCATCCTCACCCCATCCTCCCTGCACGTCCCCGTACTCTACTTCTCCCTCCTCTCCCTCGGCGTCACCATCGCCCCCGCCAACCCGCTCAGTTCCCTATCCGAGTTGACTCACATCGTCAAACTCGCCAAACCCGCCATCGCGTTCTCCACCTCGAACGCCGCGAAAAACATTCCCTCCCTCAAATTCGGCACAATCCTCCTCGATTCCCCGTTCTTCCTCTCCATGCTCGACGACGACGAAACCGTTAACAGAGACTCGCGTGCTCACCGAGTCGAAGAAGTGAGTCAGTCTGACTCGGCGGCGATTCTATTCTCCTCTGGCACCACGGGGCGCGTGAAGGGCGTGCTCCTCACGCACCGCAACTTCATCACGCTGATCGGAGGGTTCTATCACCTCAGAAACGTGGCGGATGGTGACCCTCACCCGGTGTCGCTCTTCACGCTGCCGCTGTTCCACGTGTTCGGGTTCTTCATGCTGGTCAGGGCCATCGCCGTCGGGGAGACGCTCGTGTTCATGCAGAGGTTCGATTTCGAAGGGATGCTAAAGGCTGTGGAGAGGTATGGAATCACGTACATGCCGGTGTCGCCGCCGCTCGTGGTGGCGCTGGCGAAGTCGGAACTCGTGAAGAAGTATGATCTCAGCTCGCTACGGTATTTGGGCTGTGGCGGCGCGCCGCTCGGGAAGGAAGTCGCCGACGACTTCAGAGGCAAATTCCCTAACGTGGAAATTGGGCAGGGATATGGTTTGACTGAAAGTGGAGGAGGGGCAGCTAGAGTGTTAGGGCCTGATGAGTCTAAGCGCCATGGTTCTGTGGGTCGACTAGCAGAAAATATGGAGGCCAAGATAGTGGACCCTGTTACTGGAGAGGCATTACCTCCTGGCCAAAAAGGGGAGCTCTGGTTGCGAGGTCCAACAATCATGAAAGGTTATGTAGGAGATGAGAAGGCGACAGCTGAAACATTGGATTCAGAAGGGTGGCTGAAGACGGGAGATCTTTGTTATTTTGACTCTGATGGCTTCCTCTACATTGTAGATAGACTGAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCTGCTGAATTGGAACATATACTACACACCAATCCCGAAATTGCTGATGCTGCAGTAGTTCCGTATCCTGATGAAGAGGCAGGGCAGATTCCAATGGCCTTTGTAGTAAGAAAACCTGGAAGCAACGTCACTGCAGATCAGGTCATGGAGTTTGTGGCAAAGCAGGTTTCTCCATACAAGAAGATACGACGAGTTTCTTTTATCAAATCTATCCCAAAATCTCCGGCTGGGAAAATTTTGAGAAGAGAATTAGTTGATTATGCACTATCTAGTGGTTCATCCAAATTGTGA 1674 0.5299 MATQTQTQSHPNTTIDPNSGFCSHSRTFHTLRPNVPLPPPSHPLSLTDYAFSLLPAAATTTSALIDAATDRHLSYSLLLRQVQSLASSLQSLTPLSKGHVALILTPSSLHVPVLYFSLLSLGVTIAPANPLSSLSELTHIVKLAKPAIAFSTSNAAKNIPSLKFGTILLDSPFFLSMLDDDETVNRDSRAHRVEEVSQSDSAAILFSSGTTGRVKGVLLTHRNFITLIGGFYHLRNVADGDPHPVSLFTLPLFHVFGFFMLVRAIAVGETLVFMQRFDFEGMLKAVERYGITYMPVSPPLVVALAKSELVKKYDLSSLRYLGCGGAPLGKEVADDFRGKFPNVEIGQGYGLTESGGGAARVLGPDESKRHGSVGRLAENMEAKIVDPVTGEALPPGQKGELWLRGPTIMKGYVGDEKATAETLDSEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVVPYPDEEAGQIPMAFVVRKPGSNVTADQVMEFVAKQVSPYKKIRRVSFIKSIPKSPAGKILRRELVDYALSSGSSKL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01882 557 Gene3D - 32 450 IPR042099 -
Gma04g01882 557 SUPERFAMILY Acetyl-CoA synthetase-like 60 550 - -
Gma04g01882 557 MobiDBLite consensus disorder prediction 1 20 - -
Gma04g01882 557 Pfam AMP-binding enzyme 62 455 IPR000873 -
Gma04g01882 557 Pfam AMP-binding enzyme C-terminal domain 464 539 IPR025110 -
Gma04g01882 557 CDD 4CL 61 545 - -
Gma04g01882 557 ProSitePatterns Putative AMP-binding domain signature. 204 215 IPR020845 -
Gma04g01882 557 Gene3D - 451 551 IPR045851 -
Gma04g01882 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 30 546 - -
Gma04g01882 557 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 30 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01882 Gma-Chr4 49054277 49061680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01882 7 557 Monolignol Biosynthesis Gene Families AT5G63380 60.247 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01882 K01904 - gmx:100777435 1060.06