Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01852 ATGGATTCCCCTGCAGTTTCCTCTATCCACTTTCACAACGCCCATGTCTTACCCGAACCAGACCTTTTTATGCACACTCCCGGTGGTAACCGCATTCCAGCGCACGCAACCATTCTGGCTTCGGCATCCCCAGTTTTAGAAAACGTCATTGCGTCCAACCGAGTCGTCAAAATCCACGGCGTTCCCGACGGCGCCGTCACGGCCTTCGTAGCGTTCCTCTACTCCTCCAGGTGCACGGAGGAGGACATGGACAAGTACGGAATCCACCTTCTAGCATTGTCGCACGTGTATTCGGTGCCGCAGCTGAAGCAGAGGTGCATCAAGGGACTGGCCCAGCGCTTGAGCACGGAGAACGTGGTGGACGTGTTGCAACTCTCTCGGCTCTGCGACGCACCGGATCTCTACCTCAAGTGCGTGAAGCTCCTCAGGAACCGTTTCAAAGCCGTGAAGGAAACAGAGGGCTGGAAATTCCTCGAGAGCCACGACCCCTGGCTCGAACTCGACGTTCTCCGCCTCATGGGCGAACTCGAAAAGAGGAAGAGGAGGGTGAGGAAGTGGAGGGAGGAGGAGAGGTTGTACGTGCAGCTGAGCGAGGCGATGGAGTGTTTGGAGCACATATGCACGGAGGGGTGTACGGAGGTGGGGCCATACGAGGTGGAGGTTGGACGACAGAAAACGCCGTGCTCAAAGTTCGCCACGTGTCAGGGTTTGCAGGTGTTGATACGACACTTGGGAACTTGCAACAGGAAGCTCAAAGGAGGGTGTTTGCGGTGTAAGCGTATGTGGCAGCTCTTCAGGCTCCACTCCTCCATTTGCCTATGCCAGAATTCATGCAAGGTTCCTCTTTGCAGGCAAATTCGATTAAAAATGGAGCAAGAGAACATGAAAGATGACGCAAGGTGGAAACTACTGGTGAGGAAGGTGGCCTCGGCCAAAGCCTTGTCTTCCTTGGCGCTGCCAAAGAGGAAATTAGATCAGAGCTAG 984 0.5498 MDSPAVSSIHFHNAHVLPEPDLFMHTPGGNRIPAHATILASASPVLENVIASNRVVKIHGVPDGAVTAFVAFLYSSRCTEEDMDKYGIHLLALSHVYSVPQLKQRCIKGLAQRLSTENVVDVLQLSRLCDAPDLYLKCVKLLRNRFKAVKETEGWKFLESHDPWLELDVLRLMGELEKRKRRVRKWREEERLYVQLSEAMECLEHICTEGCTEVGPYEVEVGRQKTPCSKFATCQGLQVLIRHLGTCNRKLKGGCLRCKRMWQLFRLHSSICLCQNSCKVPLCRQIRLKMEQENMKDDARWKLLVRKVASAKALSSLALPKRKLDQS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01852 327 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 7 326 IPR044513 -
Gma04g01852 327 Gene3D TAZ domain 186 312 IPR035898 -
Gma04g01852 327 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 7 326 - -
Gma04g01852 327 SUPERFAMILY POZ domain 28 111 IPR011333 -
Gma04g01852 327 ProSiteProfiles BTB domain profile. 20 82 IPR000210 GO:0005515
Gma04g01852 327 SUPERFAMILY TAZ domain 188 287 IPR035898 -
Gma04g01852 327 Gene3D Potassium Channel Kv1.1; Chain A 19 114 IPR011333 -
Gma04g01852 327 SMART TAZ_2 190 284 IPR000197 -
Gma04g01852 327 Pfam TAZ zinc finger 197 283 IPR000197 -
Gma04g01852 327 CDD BACK 115 162 - -
Gma04g01852 327 Gene3D - 115 185 - -
Gma04g01852 327 Pfam BTB/POZ domain 29 112 IPR000210 GO:0005515
Gma04g01852 327 SMART BTB_4 20 114 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01852 Gma-Chr4 48613012 48615882 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Gma04g01852 zf-TAZ 8.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01852 - - gmx:100813611 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01852 04 48613012 48615882 Gma04g01852 04 48613012 48615882 ECH
Gma17g01174 17 10260656 10263453 Gma04g01852 04 48613012 48615882 PCT
Gma05g00417 05 3921124 3924664 Gma04g01852 04 48613012 48615882 PCT
Gma04g01852 04 48613012 48615882 Gma17g01174 17 10260656 10263453 PCT
Gma04g01852 04 48613012 48615882 Gma05g00417 05 3921124 3924664 PCT