Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01842 ATGGATTTTTTATGTGCTTTGTTATGGGTAACTGGGTACACAGTTCAGCTTTCAAACAAGCCCCTTCTTGATGTCCGTCTCTCAAATGAACACACAAAGGCATGGATTTTGGAACCATTCCAAGAAAAGTCAGGAGCTTTGTTATGGTTCTTAGACAAAGTTGAGGAGAAGTTCCCCAAAGATGCTGAATTAATTGTTGCATGCCAGAAGGGACTGAGATCACTTGCTGCTTGTGAACTACTGTATAATGCTGGCTATAAAAATCTGTTTTGGGTTCAAGGAGGATATGAAGCTGCTGAAGGAGAGGATTTCATTGTAGAGGGCCCCAGTGCCTCTCAAGTTTTCTGGAATTGGATATGGTTGCAAATTTCCGACTTCATAATTATTTCCAGTTGGACTGATCAACAAAGAGCAGCTGCAGCCAAGGAAGGTTGGGGATATAGATTAGTGTTTTCTGCACGCCTGATTGGAGTCTTTCTCGTTGCCGATGCCCTATATTTTGGTGCTCAGCAAATTGGGCGCTATCTTCAGGATATCTGGACCCATTGA 549 0.4281 MDFLCALLWVTGYTVQLSNKPLLDVRLSNEHTKAWILEPFQEKSGALLWFLDKVEEKFPKDAELIVACQKGLRSLAACELLYNAGYKNLFWVQGGYEAAEGEDFIVEGPSASQVFWNWIWLQISDFIIISSWTDQQRAAAAKEGWGYRLVFSARLIGVFLVADALYFGAQQIGRYLQDIWTH 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01842 182 ProSiteProfiles Rhodanese domain profile. 50 108 IPR001763 -
Gma04g01842 182 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 21 98 IPR036873 -
Gma04g01842 182 Pfam Rhodanese-like domain 18 98 IPR001763 -
Gma04g01842 182 CDD RHOD 22 98 - -
Gma04g01842 182 Gene3D - 13 145 IPR036873 -
Gma04g01842 182 SMART rhod_4 5 105 IPR001763 -
Gma04g01842 182 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 11 36 IPR044664 -
Gma04g01842 182 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 50 180 IPR044664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01842 Gma-Chr4 48522190 48525345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01842 12 182 Sulfurtransferasese or Rhodanese AT4G24750 53.960 1.13e-62 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01842 - - gsj:114409887 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01842 04 48522190 48525345 Gma04g01842 04 48522190 48525345 ECH
Gma04g01842 04 48522190 48525345 Gma06g01568 06 15232575 15236537 GST