Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01831 ATGCCGCCGGATTCCTCCGAGCTAGACCTCGACGATCCTGACATCGAGTTTGTTGAGGTTGATCCCACGGGTCGCTATGGTCGGTACAAGGAAGTTTTAGGGAAAGGGGCTTTCAAGAAAGTATATCGAGCGTTTGATGAGTTGGAAGGGATTGAAGTGGCGTGGAATCAGGTTAAGGTGGCGGATCTGTTGCGTAACTCTGAAGATTTGGAGCGACTTTATTCAGAAGTTCATTTGCTCAAGACTTTGAAGCATAAGAATATAATTAAGTTTTACAATTCATGGGTTGACACCAAGAATGAGAACATCAACTTCATTACTGAAATTTTCACCTCTGGAACGTTGCGCCAATACCGGAAGAAACATAAGCACGTTGATTTGAGAGCTGTGAAGAAATGGTCTAGGCAGATTTTGGAAGGCCTTTTATATCTTCACAGTCACAATCCACCGGTTATTCACCGAGACCTTAAGTGCGATAACATTTTTGTCAATGGGAATCAAGGGGAGGTGAAAATTGGTGATTTAGGATTGGCGGCTATCCTTCAACAGGCCAATTCAGCTCACAGTGTCATAGGTACCCCTGAGTTCATGGCCCCAGAACTTTATGAAGAGGAATACAATGAGCTTGTTGACATCTATGCTTTTGGCATGTGCTTGCTAGAGTTGGTAACTGTTGAGTACCCATATATTGAATGTACCAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATAAAGCCAGCGTCATTGGCAAAGGTGGCGGATCTTGAAGTTAAAGCATTTATTGAAAAGTGTATTGCTGATGTATCGGAACGGTTGTCTGCAAAAGACCTCCTGATGGATCCCTTCCTTCAGTCAGATAATGATAATGATAGTGTAGGTCAATCTTCAAGATCTCAAACCCATCATTCAGGAAATAGTTCTCATATAGCTGTTGAGCCAAGTAGGGAATTCACGGTGGAAGGTCAGAGGAGAGATAATCATACAATATTTTTAAAATTGCGAATTGCAGATTCCTCAGGTAATATTCGCAATATCCACTTTCCTTTTGATATTGAAGCAGACACATCAATCTCTGTTGCTGGTGAAATGGTTGAGGAGTTGGAACTCACTGATCAAGATGTTACAACTATTGCTAGGATGATTGATTCTGAAATTCGATATCACATTCCTAGTTGGAATTTCAGTGAAACTCCTCTTGACATTAACCATCAAGATTCAAGCTGTACCTCTGAAACTAGGCCAGAGACCTCTCCTATGAAAAATGATTCCATTGCTTCTCCTGGCAGTCTTGCATTAGAAATATTACCTTCAGGTCGTAGGTACTGGTCAGATTCACCAAGGGGAGTTGGAGGAAACTCTCCATCTCAACATTTTACTTCAATCTTGTCTAATGAAACAGGTGTGAATGCTGAGGAAGGCAACCTGATTACAAATGGTGATATTTCAGCTAATGATTGTGTTGATGGTACTGCTGAGCGGGAATGTGATGAGATTGCTGATTCCCCTTCCAGTGAGATAAGTATTACATCGGGAGCAACTAGTGAAAAATCTTCTCAGAAAGAAATATCTCGAAGTCTAAAAGATTCTGAAACGGAATACATCAATCAAATAACAACTAAATTGGAGAATTTGTTGGTTAAACAAAGAGAGGAGTTAGATGAACTAAAGAGGAAGCACAAATTAGCTGTCTCAGATCTTTTGATGGAAATTCCTCCAGAAATGTGCCAGAAGGTCCTAAACGTATGCAACCTGCAGATGCCTGACGGTGAAATGGCGATGCTTGTCCTTCATTAA 1800 0.41 MPPDSSELDLDDPDIEFVEVDPTGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQVKVADLLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRAVKKWSRQILEGLLYLHSHNPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYIECTNAAQIYKKVTSGIKPASLAKVADLEVKAFIEKCIADVSERLSAKDLLMDPFLQSDNDNDSVGQSSRSQTHHSGNSSHIAVEPSREFTVEGQRRDNHTIFLKLRIADSSGNIRNIHFPFDIEADTSISVAGEMVEELELTDQDVTTIARMIDSEIRYHIPSWNFSETPLDINHQDSSCTSETRPETSPMKNDSIASPGSLALEILPSGRRYWSDSPRGVGGNSPSQHFTSILSNETGVNAEEGNLITNGDISANDCVDGTAERECDEIADSPSSEISITSGATSEKSSQKEISRSLKDSETEYINQITTKLENLLVKQREELDELKRKHKLAVSDLLMEIPPEMCQKVLNVCNLQMPDGEMAMLVLH 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01831 599 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 589 - -
Gma04g01831 599 MobiDBLite consensus disorder prediction 406 428 - -
Gma04g01831 599 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01831 599 MobiDBLite consensus disorder prediction 406 426 - -
Gma04g01831 599 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Gma04g01831 599 MobiDBLite consensus disorder prediction 504 521 - -
Gma04g01831 599 MobiDBLite consensus disorder prediction 290 314 - -
Gma04g01831 599 CDD STKc_WNK 25 285 - -
Gma04g01831 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Gma04g01831 599 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Gma04g01831 599 Gene3D - 329 417 - -
Gma04g01831 599 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01831 599 MobiDBLite consensus disorder prediction 499 528 - -
Gma04g01831 599 Coils Coil 540 567 - -
Gma04g01831 599 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01831 599 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 333 387 IPR024678 GO:0004674|GO:0005524
Gma04g01831 599 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Gma04g01831 599 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 7 589 - -
Gma04g01831 599 MobiDBLite consensus disorder prediction 290 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01831 Gma-Chr4 48425293 48428909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01831 17 394 MAP Kinase Kinase Kinase AT3G22420 55.046 8.59e-165 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gma04g01831 Pkinase 6.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01831 K08867 - gmx:100301899 1110.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01831 04 48425293 48428909 Gma04g01831 04 48425293 48428909 ECH
Gma04g01831 04 48425293 48428909 Gma06g01578 06 15323884 15328215 GST